RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ATICP31939 592 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 PHKA2P46019 1235 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 NEK3P51956 506 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
CD44-209ENST00000433892 CDHR3Q6ZTQ4 885 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 PPM1NQ8N819 430 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 FAXDC2Q96IV6 333 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
CD44-209ENST00000433892 FBXO6Q9NRD1 293 aaPredicted RBP12.29□□□□□ -0.44
CD44-209ENST00000433892 LTBP3Q9NS15 1303 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 SLC5A4Q9NY91 659 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 RGS17Q9UGC6 210 aaPredicted RBP12.29□□□□□ -0.44
CD44-209ENST00000433892 KAT6AQ92794 2004 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 CXorf49A8MYA2 514 aaPredicted RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 ENTPD5O75356 428 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 VTNP04004 478 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PFKMP08237 780 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 MCF2P10911 925 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 INSRRP14616 1297 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ARF4P18085 180 aaPredicted RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 SLC26A2P50443 739 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ARFIP2P53365 341 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 BCAR1P56945 870 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 YWHAZP63104 245 aaKnown RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 SLC18A2Q05940 514 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 TMEM132DQ14C87 1099 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 SPDYAQ5MJ70 313 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 LCLAT1Q6UWP7 414 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 MAP7D3Q8IWC1 876 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PQLC3Q8N755 202 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 NUDCD1Q96RS6 583 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 MIPEPQ99797 713 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ASB7Q9H672 318 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 DENND2DQ9H6A0 471 aaPredicted RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 KCNK13Q9HB14 408 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 SAR1AQ9NR31 198 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PAK5Q9P286 719 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 AKT3Q9Y243 479 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PTPRFP10586 1907 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 BRCA1P38398 1863 aaKnown RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 MCM3APO60318 1980 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 H0Y3Z8 333 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 CALB2P22676 271 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 SERPINB3P29508 390 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 TNFAIP2Q03169 654 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 KCTD2Q14681 263 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PRKD1Q15139 912 aaPredicted RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 CA9Q16790 459 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PMF1Q6P1K2 205 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 CAND1Q86VP6 1230 aaKnown RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 SLC26A11Q86WA9 606 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 CHSY1Q86X52 802 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 SCUBE3Q8IX30 993 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PCDH19Q8TAB3 1148 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 FAM172AQ8WUF8 416 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 MIEF2Q96C03 454 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 PRR11Q96HE9 360 aaPredicted RBP12.28□□□□□ -0.44
CD44-209ENST00000433892 NT5C1AQ9BXI3 368 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 TMEM120AQ9BXJ8 343 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 NFKBIZQ9BYH8 718 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ARL8BQ9NVJ2 186 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 ERAP1Q9NZ08 941 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 LNPEPQ9UIQ6 1025 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 LRRC37A2A6NM11 1700 aa12.28□□□□□ -0.44
CD44-209ENST00000433892 COPEO14579 308 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 APOL1O14791 398 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 SPAG6O75602 509 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 HAUS5O94927 633 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 ZBED1O96006 694 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 C1QAP02745 245 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 DLDP09622 509 aaKnown RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 TPBGLP0DKB5 382 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 GNAZP19086 355 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 SERPINB4P48594 390 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 SLC8A3P57103 927 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 ZBTB16Q05516 673 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 INCA1Q0VD86 236 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 TTC39BQ5VTQ0 682 aaPredicted RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 BZW1Q7L1Q6 419 aaKnown RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 MAB21L3Q8N8X9 362 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 CCDC110Q8TBZ0 833 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 STK32AQ8WU08 396 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 SRPK1Q96SB4 655 aaKnown RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 MMP19Q99542 508 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 TRIM56Q9BRZ2 755 aaKnown RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 IQCGQ9H095 443 aaKnown RBP12.27□□□□□ -0.44
CD44-209ENST00000433892 PLAC1Q9HBJ0 212 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 GBA2Q9HCG7 927 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms