RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 TSHRP16473 764 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 ZNF143P52747 638 aaPredicted RBP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 YWHAGP61981 247 aaKnown RBP eCLIP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 PDCD2Q16342 344 aaPredicted RBP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 SPDYAQ5MJ70 313 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 C1orf228Q6PIY5 440 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 COPS5Q92905 334 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 FGD4Q96M96 766 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 KCNK13Q9HB14 408 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 TNFSF13BQ9Y275 285 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 PTPRFP10586 1907 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 SMAPO00193 183 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 USP2O75604 605 aaPredicted RBP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 GRAP2O75791 330 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 C1QAP02745 245 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 PYGBP11216 843 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 PCK1P35558 622 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 ZNF200P98182 395 aaPredicted RBP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 VGLL4Q14135 290 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 CELF3Q5SZQ8 465 aaKnown RBP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 EFCAB12Q6NXP0 572 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 B4GALNT2Q8NHY0 566 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 TTC8Q8TAM2 541 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 RXFP2Q8WXD0 754 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 TSSK1BQ9BXA7 367 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 DENND2DQ9H6A0 471 aaPredicted RBP19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 USP29Q9HBJ7 922 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 ASNSD1Q9NWL6 643 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 KAT6AQ92794 2004 aa19.6■□□□□ 0.73
BLOC1S3-201ENST00000433642 IL18RAPO95256 599 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 STAG3L1P0CL83 205 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 CALB2P22676 271 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 PTPN4P29074 926 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 CDO1Q16878 200 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 PLPPR4Q7Z2D5 763 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 LRRN4Q8WUT4 740 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 HEXIM2Q96MH2 286 aaKnown RBP19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 TLE6Q9H808 572 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 HEY2Q9UBP5 337 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 BRCA1P38398 1863 aaKnown RBP19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 IQANK1A0A1B0GTG1 560 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 C2CD4BA6NLJ0 364 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 ENTPD5O75356 428 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 TPBGLP0DKB5 382 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 BGNP21810 368 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 STIP1P31948 543 aaKnown RBP19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 SLC18A2Q05940 514 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 ACAP1Q15027 740 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 TTC17Q96AE7 1141 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 FAF2Q96CS3 445 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 APOPT1Q96IL0 206 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 SAR1AQ9NR31 198 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 ARL8BQ9NVJ2 186 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 PPP1R1BQ9UD71 204 aaPredicted RBP19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 LNPEPQ9UIQ6 1025 aa19.59■□□□□ 0.73
BLOC1S3-201ENST00000433642 C2orf71A6NGG8 1288 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 H7C0C1 242 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 MAP3K6O95382 1288 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 PDGFRAP16234 1089 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 GPD1P21695 349 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 IL4RP24394 825 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 ATP5OP48047 213 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 RASSF2P50749 326 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 FAXCQ5TGI0 409 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 CDHR3Q6ZTQ4 885 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 FAM183BPQ6ZVS7 135 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 STK32AQ8WU08 396 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 SPATA33Q96N06 139 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 PPP1R16BQ96T49 567 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 CNPY3Q9BT09 278 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 TRIM55Q9BYV6 548 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 PLAC1Q9HBJ0 212 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 FBXO6Q9NRD1 293 aaPredicted RBP19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 RAB6BQ9NRW1 208 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 GPATCH2LQ9NWQ4 482 aa19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 POLR2AP24928 1970 aaKnown RBP19.58■□□□□ 0.73
BLOC1S3-201ENST00000433642 E5RJQ4 531 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 ZBTB7AO95365 584 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 INHBAP08476 426 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 CFAP36Q96G28 342 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 NUDCD1Q96RS6 583 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 IFT122Q9HBG6 1241 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 CNTN3Q9P232 1028 aa19.58■□□□□ 0.72
BLOC1S3-201ENST00000433642 CFAP69A5D8W1 941 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 HMGCRP04035 888 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 YWHAZP63104 245 aaKnown RBP19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 TAF11Q15544 211 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 RFWD3Q6PCD5 774 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 CHSY1Q86X52 802 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 PLD5Q8N7P1 536 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 RNF157Q96PX1 679 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 CADM1Q9BY67 442 aaKnown RBP19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 TTLL3Q9Y4R7 772 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 IKBKGQ9Y6K9 419 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 MCM3APO60318 1980 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 CXorf49A8MYA2 514 aaPredicted RBP19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 PDHA1P08559 390 aa19.57■□□□□ 0.72
BLOC1S3-201ENST00000433642 SERPINB3P29508 390 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms