RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 NOS2P35228 1153 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 CDKN2BP42772 138 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 HDAC4P56524 1084 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 PPIGQ13427 754 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEFM-202ENST00000433454 DHX34Q14147 1143 aaKnown RBP11.05□□□□□ -0.64
NEFM-202ENST00000433454 BTG3Q14201 252 aaPredicted RBP11.05□□□□□ -0.64
NEFM-202ENST00000433454 SLC25A52Q3SY17 297 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 SCYL2Q6P3W7 929 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 OTOP2Q7RTS6 562 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 TMCO2Q7Z6W1 182 aaPredicted RBP11.05□□□□□ -0.64
NEFM-202ENST00000433454 SCML4Q8N228 414 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 KCTD6Q8NC69 237 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 IRGQQ8WZA9 623 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 HSPH1Q92598 858 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 IGSF21Q96ID5 467 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 ZNF558Q96NG5 402 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 PEBP4Q96S96 227 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 HERPUD2Q9BSE4 406 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEFM-202ENST00000433454 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 YJEFN3A6XGL0 299 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 E7ENQ6 273 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 CAPN9O14815 690 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 KDELR1P24390 212 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 FNTAP49354 379 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 SULT1E1P49888 294 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 DR1Q01658 176 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 SMARCB1Q12824 385 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 USP41Q3LFD5 358 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 BOLA3Q53S33 107 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 PM20D1Q6GTS8 502 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 KCNT2Q6UVM3 1135 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 STRADAQ7RTN6 431 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 IFT20Q8IY31 132 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
NEFM-202ENST00000433454 TEKT4Q8WW24 435 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 YME1L1Q96TA2 773 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 ARFGAP3Q9NP61 516 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 HOMER3Q9NSC5 361 aa11.05□□□□□ -0.64
NEFM-202ENST00000433454 hCG_1818297A0A087WSY0 165 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 C3orf70A6NLC5 250 aaPredicted RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 TRIM66O15016 1216 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 LTFP02788 710 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 KRT10P13645 584 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 LAG3P18627 525 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TFE3P19532 575 aaPredicted RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 MAGEA11P43364 429 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 SLC5A3P53794 718 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 GUCY2DQ02846 1103 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 RAB6CQ53S08 254 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 KAZNQ674X7 775 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 CCDC137Q6PK04 289 aaKnown RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 TMCO3Q6UWJ1 677 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 HFE2Q6ZVN8 426 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 CYP4V2Q6ZWL3 525 aaPredicted RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 ANKS1BQ7Z6G8 1248 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 SCN4BQ8IWT1 228 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 HNRNPLLQ8WVV9 542 aaKnown RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 PGLYRP2Q96PD5 576 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TRIM62Q9BVG3 475 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 RAB6CQ9H0N0 254 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 PLEKHA4Q9H4M7 779 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 LRRC19Q9H756 370 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 PCYOX1Q9UHG3 505 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 EFR3BQ9Y2G0 817 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 USP3Q9Y6I4 520 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 MDM4O15151 490 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TTI1O43156 1089 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 EFEMP2O95967 443 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TNFRSF8P28908 595 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 ARPP19P56211 112 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 RBM10P98175 930 aaKnown RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 FPGSQ05932 587 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 GPR17Q13304 367 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 KIAA1841Q6NSI8 718 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 MAP7D3Q8IWC1 876 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 RNF168Q8IYW5 571 aaPredicted RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 NT5C3BQ969T7 300 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 TMEM169Q96HH4 297 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 C8orf48Q96LL4 319 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 HINFPQ9BQA5 517 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 CALN1Q9BXU9 219 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 RASAL2Q9UJF2 1139 aa11.04□□□□□ -0.64
NEFM-202ENST00000433454 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
NEFM-202ENST00000433454 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
NEFM-202ENST00000433454 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
NEFM-202ENST00000433454 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
NEFM-202ENST00000433454 COILP38432 576 aaPredicted RBP11.03□□□□□ -0.64
NEFM-202ENST00000433454 CDH6P55285 790 aa11.03□□□□□ -0.64
NEFM-202ENST00000433454 KRT81Q14533 505 aa11.03□□□□□ -0.64
NEFM-202ENST00000433454 TAZQ16635 292 aa11.03□□□□□ -0.64
NEFM-202ENST00000433454 TTC27Q6P3X3 843 aa11.03□□□□□ -0.64
NEFM-202ENST00000433454 PRSS55Q6UWB4 352 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms