RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMPRSS11DO60235 418 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 CYP2A6P11509 494 aaPredicted RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 CD19P15391 556 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 IL1R2P27930 398 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 ARHGAP25P42331 645 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 COPB1P53618 953 aaKnown RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 SSBP2P81877 361 aaPredicted RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 LMAN2Q12907 356 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 SEMA5AQ13591 1074 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 TMEM63BQ5T3F8 832 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 LRCH2Q5VUJ6 765 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 PAPD7Q5XG87 772 aaKnown RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 MZT2AQ6P582 158 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 UNC13DQ70J99 1090 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 SDR16C5Q8N3Y7 309 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 GALNT16Q8N428 558 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 DENND1AQ8TEH3 1009 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 MSLNLQ96KJ4 702 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 PDGFCQ9NRA1 345 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 MGAT4CQ9UBM8 478 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 LPAR3Q9UBY5 353 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 NKX1-2Q9UD57 310 aaPredicted RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 WDR17Q8IZU2 1322 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 SMIM35A0A1B0GVV1 85 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 KCNU1A8MYU2 1149 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 SNX2O60749 519 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 RNF8O76064 485 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 BTF3P20290 206 aaKnown RBP4.05□□□□□ -1.76
CLK1-204ENST00000432425 MMP13P45452 471 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 DIO1P49895 249 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 ZNF268Q14587 947 aaPredicted RBP4.05□□□□□ -1.76
CLK1-204ENST00000432425 PLAG1Q6DJT9 500 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 ZNF425Q6IV72 752 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 TMEM65Q6PI78 240 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 SLC2A7Q6PXP3 512 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 FMNL3Q8IVF7 1028 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 SCARB1Q8WTV0 552 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 TTC17Q96AE7 1141 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 SNX22Q96L94 193 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 HS6ST2Q96MM7 605 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 HIST1H2AAQ96QV6 131 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 STRBPQ96SI9 672 aaKnown RBP4.05□□□□□ -1.76
CLK1-204ENST00000432425 FAM118BQ9BPY3 351 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 ASIC5Q9NY37 505 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 STEAP1Q9UHE8 339 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 BTBD3Q9Y2F9 522 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 CACNA1IQ9P0X4 2223 aa4.05□□□□□ -1.76
CLK1-204ENST00000432425 TCRBV5S1A1TA0A578 114 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 FOXN3O00409 490 aaPredicted RBP4.04□□□□□ -1.76
CLK1-204ENST00000432425 PPM1GO15355 546 aaPredicted RBP4.04□□□□□ -1.76
CLK1-204ENST00000432425 SPRY2O43597 315 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 MT-CO3P00414 261 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 MT-ND5P03915 603 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 PARP1P09874 1014 aaKnown RBP4.04□□□□□ -1.76
CLK1-204ENST00000432425 KLF9Q13886 244 aaPredicted RBP4.04□□□□□ -1.76
CLK1-204ENST00000432425 ETFDHQ16134 617 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 ST3GAL2Q16842 350 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 EPHA10Q5JZY3 1008 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 C11orf44Q8N8P7 122 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 CTHRC1Q96CG8 243 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 PRSS22Q9GZN4 317 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 PNPLA8Q9NP80 782 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 TBC1D23Q9NUY8 699 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 KLHL13Q9P2N7 655 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 DNAJB11Q9UBS4 358 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 RIMKLBQ9ULI2 386 aa4.04□□□□□ -1.76
CLK1-204ENST00000432425 AGPSO00116 658 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 DSCR3O14972 297 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 ANXA2P07355 339 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 PTGER1P34995 402 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 GALEQ14376 348 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 KCNAB1Q14722 419 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 VSTM1Q6UX27 236 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 ZNF813Q6ZN06 617 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 RNF44Q7L0R7 432 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 PRSS3P2Q8NHM4 247 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 MAFAQ8NHW3 353 aaPredicted RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 WDYHV1Q96HA8 205 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 VPS50Q96JG6 964 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 EFHD1Q9BUP0 239 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 APOL5Q9BWW9 433 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 BRIP1Q9BX63 1249 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 UNKQ9C0B0 810 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 CORO2BQ9UQ03 480 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 CYP2D7A0A087X1C5 515 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 RHPN2P1A8MT19 583 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 A8MVJ9 347 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 TP73O15350 636 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 THAP12O43422 761 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 PQBP1O60828 265 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 APEHP13798 732 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 RBL1P28749 1068 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 NTSR1P30989 418 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 TXNL4AP83876 142 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 HNRNPA0Q13151 305 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 LARS2Q15031 903 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 CLEC9AQ6UXN8 241 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 DCDC5Q6ZRR9 648 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 DGKHQ86XP1 1220 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms