RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 AP4E1Q9UPM8 1137 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 GLTPD2A6NH11 291 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 APOC4-APOC2K7ER74 178 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 M0QYT0 321 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 CYB561D2O14569 222 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 KRT37O76014 449 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 APOC2P02655 101 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 NUMBP49757 651 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 ZNF143P52747 638 aaPredicted RBP11.87□□□□□ -0.51
CLDN4-202ENST00000431918 CLDN10P78369 228 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 ADIGQ0VDE8 80 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 SHCBP1Q8NEM2 672 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 SNRNP25Q9BV90 132 aaKnown RBP11.87□□□□□ -0.51
CLDN4-202ENST00000431918 DPEP3Q9H4B8 488 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 ETAA1Q9NY74 926 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 PAK5Q9P286 719 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 KIAA1257Q9ULG3 409 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
CLDN4-202ENST00000431918 CASTOR2A6NHX0 329 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 CLDN5O00501 218 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 TREHO43280 583 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 CYP2F1P24903 491 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 STIP1P31948 543 aaKnown RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 GJA5P36382 358 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 ATXN1P54253 815 aaKnown RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 MAP3K7CLP57077 242 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 CCDC6Q16204 474 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 IQSEC1Q6DN90 963 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SCN4BQ8IWT1 228 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 ARL2BPQ9Y2Y0 163 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SCTRP47872 440 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SLC6A3Q01959 620 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 PTP4A2Q12974 167 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 DENND5BQ6ZUT9 1274 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 PIWIL1Q96J94 861 aaKnown RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 LBHD1Q9BQE6 289 aaPredicted RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 LHX5Q9H2C1 402 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 ABCF3Q9NUQ8 709 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 C2CD2Q9Y426 696 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 KBTBD13C9JR72 458 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SOCS7O14512 581 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 UBOX5O94941 541 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 PSEN2P49810 448 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 RABGGTBP53611 331 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 BCAT1P54687 386 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 TMPRSS15P98073 1019 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 DPYSL3Q14195 570 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 TCEAL1Q15170 157 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SV2CQ496J9 727 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 EFHC2Q5JST6 749 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 TSNARE1Q96NA8 513 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 C12orf65Q9H3J6 166 aaKnown RBP11.86□□□□□ -0.51
CLDN4-202ENST00000431918 SLC40A1Q9NP59 571 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 KLC4Q9NSK0 619 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 DOCK5Q9H7D0 1870 aa11.86□□□□□ -0.51
CLDN4-202ENST00000431918 A0A1W2PPM1 405 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 MOCS2O96007 188 aaPredicted RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 YY1P25490 414 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ENPEPQ07075 957 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ZNF252P-AS1Q0IIN9 211 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 BMPR2Q13873 1038 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 RCN2Q14257 317 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 RAB6CQ53S08 254 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 MDH1BQ5I0G3 518 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 MROH9Q5TGP6 573 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 CXCL17Q6UXB2 119 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 CDKL2Q92772 493 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 PGBD4Q96DM1 585 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 RAB6CQ9H0N0 254 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 AAASQ9NRG9 546 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 NR2E3Q9Y5X4 410 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 KIAA1217Q5T5P2 1943 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 TRIM49D1C9J1S8 452 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ITGAVP06756 1048 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 NCAM1P13591 858 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 GPD2P43304 727 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 CPT1AP50416 773 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 METTL23Q86XA0 190 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 DEFB106AQ8N104 65 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 CLEC4CQ8WTT0 213 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 FAM111AQ96PZ2 611 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 GAD1Q99259 594 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 DRG1Q9Y295 367 aaKnown RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 B3GAT3O94766 335 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms