RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 TUSC3Q13454 348 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 SLC29A2Q14542 456 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 GPRIN1Q7Z2K8 1008 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 FAM76AQ8TAV0 307 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 SMOQ99835 787 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 MAK16Q9BXY0 300 aaKnown RBP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 RGS18Q9NS28 235 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 EFR3BQ9Y2G0 817 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 SYNJ2BP-COX16A0A087WUM0 186 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 C9IYK1 514 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 ENDOD1O94919 500 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 ODC1P11926 461 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 LMNB2Q03252 620 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 IFFO1Q0D2I5 559 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 PPP6R3Q5H9R7 873 aaPredicted RBP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 DEFB106AQ8N104 65 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 NKD2Q969F2 451 aaPredicted RBP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 TMEM209Q96SK2 561 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 C11orf84Q9BUA3 381 aaPredicted RBP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 UNC93B1Q9H1C4 597 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 LRRC4Q9HBW1 653 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 CYLDQ9NQC7 956 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 COX16Q9P0S2 106 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 DRG1Q9Y295 367 aaKnown RBP17.41■□□□□ 0.38
USHBP1-203ENST00000431146 SQORQ9Y6N5 450 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 KBTBD13C9JR72 458 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 MAP3K6O95382 1288 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 ITGAVP06756 1048 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 FAM163BP0C2L3 166 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 MYZAPP0CAP1 466 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 IL4RP24394 825 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 PTPN9P43378 593 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 TKTL1P51854 596 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 NRLP54845 237 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 PPARDQ03181 441 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 GPS1Q13098 491 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 DCAF6Q58WW2 860 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 CLLU1OSQ5K130 101 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 DENND2CQ68D51 928 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 C1orf228Q6PIY5 440 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 HFE2Q6ZVN8 426 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 SIX6OS1Q8N1H7 587 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 TAB3Q8N5C8 712 aaPredicted RBP17.4■□□□□ 0.38
USHBP1-203ENST00000431146 ZMIZ2Q8NF64 920 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 EXOC4Q96A65 974 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 DDX23Q9BUQ8 820 aaKnown RBP17.4■□□□□ 0.38
USHBP1-203ENST00000431146 TMBIM4Q9HC24 238 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 PCDH18Q9HCL0 1135 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 UBN1Q9NPG3 1134 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 ZNF638Q14966 1978 aaKnown RBP17.4■□□□□ 0.38
USHBP1-203ENST00000431146 TET1Q8NFU7 2136 aa17.4■□□□□ 0.38
USHBP1-203ENST00000431146 GOLGA6L10A6NI86 522 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 APOC4-APOC2K7ER74 178 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 CAND2O75155 1236 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 DDHD2O94830 711 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 APOC2P02655 101 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 SKIP12755 728 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 PSEN1P49768 467 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 MRPS5P82675 430 aaKnown RBP17.39■□□□□ 0.38
USHBP1-203ENST00000431146 BOLA3Q53S33 107 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 SLC24A5Q71RS6 500 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 ZC3H18Q86VM9 953 aaKnown RBP17.39■□□□□ 0.38
USHBP1-203ENST00000431146 CCDC185Q8N715 623 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 ZNF784Q8NCA9 323 aaPredicted RBP17.39■□□□□ 0.38
USHBP1-203ENST00000431146 MYCBPAPQ8TBZ2 947 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 MYLPFQ96A32 169 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 ADAM7Q9H2U9 754 aa17.39■□□□□ 0.38
USHBP1-203ENST00000431146 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.39■□□□□ 0.38
USHBP1-203ENST00000431146 SMIM23A6NLE4 172 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 NRP1O14786 923 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 RARGP13631 454 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 DESP17661 470 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 SULT1E1P49888 294 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 EIF3EP60228 445 aaKnown RBP17.39■□□□□ 0.37
USHBP1-203ENST00000431146 SLMAPQ14BN4 828 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 KRT71Q3SY84 523 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 EFHC1Q5JVL4 640 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 UNC45BQ8IWX7 931 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 CNPY4Q8N129 248 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 SPATA18Q8TC71 538 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.39■□□□□ 0.37
USHBP1-203ENST00000431146 LRRN4Q8WUT4 740 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 RSPH1Q8WYR4 309 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 CENPIQ92674 756 aaPredicted RBP17.39■□□□□ 0.37
USHBP1-203ENST00000431146 ATP6V1G3Q96LB4 118 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 RNF157Q96PX1 679 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 ULBP1Q9BZM6 244 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 CDC42EP4Q9H3Q1 356 aaKnown RBP17.39■□□□□ 0.37
USHBP1-203ENST00000431146 DHX35Q9H5Z1 703 aaKnown RBP17.39■□□□□ 0.37
USHBP1-203ENST00000431146 TMLHEQ9NVH6 421 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 PHF24Q9UPV7 400 aa17.39■□□□□ 0.37
USHBP1-203ENST00000431146 RIPK2O43353 540 aa17.38■□□□□ 0.37
USHBP1-203ENST00000431146 ACSL3O95573 720 aa17.38■□□□□ 0.37
USHBP1-203ENST00000431146 PCSK1P29120 753 aa17.38■□□□□ 0.37
USHBP1-203ENST00000431146 SCNN1AP37088 669 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms