RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 C2orf27AQ580R0 203 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 CBWD3Q5JTY5 395 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 CBWD5Q5RIA9 395 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 LY6G5CQ5SRR4 150 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 TMEM92Q6UXU6 159 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 PRR23CQ6ZRP0 262 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 ETFBKMTQ8IXQ9 262 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
HDAC4-202ENST00000430200 ADGRG2Q8IZP9 1017 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 CCDC33Q8N5R6 958 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 TAF4BQ92750 862 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 TNIP3Q96KP6 325 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 TPSD1Q9BZJ3 242 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 NUDT5Q9UKK9 219 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 INVSQ9Y283 1065 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 FRMD4BQ9Y2L6 1034 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 ACACBO00763 2458 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 ZFHX4Q86UP3 3567 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 ATP8B3O60423 1300 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 DCDC2BA2VCK2 349 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 SGK1O00141 431 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 TLR5O60602 858 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 ADAM23O75077 832 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 EPN2O95208 641 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 ADH5P11766 374 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
HDAC4-202ENST00000430200 KIR2DL1P43626 348 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-202ENST00000430200 LMNB2Q03252 620 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 ZNF394Q53GI3 561 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 HECTD3Q5T447 861 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 PPP1R26Q5T8A7 1209 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-202ENST00000430200 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.41
HDAC4-202ENST00000430200 CEP68Q76N32 757 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 SCD5Q86SK9 330 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 UNC93AQ86WB7 457 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 MIB1Q86YT6 1006 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 ALLCQ8N6M5 410 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 PDZD8Q8NEN9 1154 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 MDGA1Q8NFP4 955 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 SPATA20Q8TB22 786 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 OVCA2Q8WZ82 227 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 HNRNPABQ99729 332 aaKnown RBP12.46□□□□□ -0.41
HDAC4-202ENST00000430200 DUSP15Q9H1R2 295 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-202ENST00000430200 ARRDC1-AS1Q9H2J1 176 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 RAB23Q9ULC3 237 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 SLC8A2Q9UPR5 921 aa12.46□□□□□ -0.41
HDAC4-202ENST00000430200 CCDC163A0A0D9SF12 145 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-202ENST00000430200 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 TULP2O00295 520 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 AXIN1O15169 862 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 ZZEF1O43149 2961 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 FAM200BP0CF97 657 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 BMP6P22004 513 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 CNR2P34972 360 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 PSMC2P35998 433 aaKnown RBP12.45□□□□□ -0.42
HDAC4-202ENST00000430200 PPP3CCP48454 512 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 MXI1P50539 228 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 TUBP50607 506 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 PDE6CP51160 858 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 ADAM9Q13443 819 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 CSRP2Q16527 193 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 EDRF1Q3B7T1 1238 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 PLK5Q496M5 336 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 FBXO43Q4G163 708 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 BHLHA9Q7RTU4 235 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 RASSF3Q86WH2 238 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 TMEM25Q86YD3 366 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 FRMD1Q8N878 549 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 IL17RCQ8NAC3 791 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 SLC4A11Q8NBS3 891 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 TATDN2Q93075 761 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 CYFIP2Q96F07 1278 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-202ENST00000430200 CYLDQ9NQC7 956 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 CDV3Q9UKY7 258 aaKnown RBP12.45□□□□□ -0.42
HDAC4-202ENST00000430200 MMP17Q9ULZ9 603 aa12.45□□□□□ -0.42
HDAC4-202ENST00000430200 TPRP12270 2363 aaKnown RBP12.44□□□□□ -0.42
HDAC4-202ENST00000430200 ASCC3Q8N3C0 2202 aaKnown RBP12.44□□□□□ -0.42
HDAC4-202ENST00000430200 HOXC11O43248 304 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-202ENST00000430200 TULP3O75386 442 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 KAT7O95251 611 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 APBB3O95704 486 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 ACO1P21399 889 aaKnown RBP12.44□□□□□ -0.42
HDAC4-202ENST00000430200 RAD23BP54727 409 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 ANKRD40Q6AI12 368 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 ANO7Q6IWH7 933 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 TTC30AQ86WT1 665 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 UBR7Q8N806 425 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 NAT16Q8N8M0 369 aa12.44□□□□□ -0.42
HDAC4-202ENST00000430200 ACDQ96AP0 544 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms