RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CYLDQ9NQC7 956 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 CYTH4Q9UIA0 394 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 DNAJC12Q9UKB3 198 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 FHOD1Q9Y613 1164 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 ZFHX2Q9C0A1 2572 aaPredicted RBP18.36■□□□□ 0.53
CTSD-203ENST00000429746 A0A1W2PQH9 124 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 H0Y858 1186 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 FOXN3O00409 490 aaPredicted RBP18.35■□□□□ 0.53
CTSD-203ENST00000429746 STK25O00506 426 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 TBX18O95935 607 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 CKMP06732 381 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 RFX1P22670 979 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 CLCN1P35523 988 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 GPD2P43304 727 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 MFAP3P55082 362 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 ARHGAP44Q17R89 818 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 ARHGAP29Q52LW3 1261 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 TRIM68Q6AZZ1 485 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 PMF1Q6P1K2 205 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 FAM71AQ8IYT1 594 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 SH3RF2Q8TEC5 729 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 KCTD13Q8WZ19 329 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 NDRG1Q92597 394 aaKnown RBP18.35■□□□□ 0.53
CTSD-203ENST00000429746 IRF7Q92985 503 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 FOXQ1Q9C009 403 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 PLCB1Q9NQ66 1216 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTSD-203ENST00000429746 GTSE1Q9NYZ3 720 aa18.35■□□□□ 0.53
CTSD-203ENST00000429746 MTF2Q9Y483 593 aaPredicted RBP18.35■□□□□ 0.53
CTSD-203ENST00000429746 MYOFQ9NZM1 2061 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 LGALS16A8MUM7 142 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 LEFTY2O00292 366 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 ZNF263O14978 683 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 SETSIPP0DME0 302 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 UCHL3P15374 230 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
CTSD-203ENST00000429746 CD72P21854 359 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 NBL1P41271 181 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 SOX9P48436 509 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 PRKCQQ04759 706 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 MTF1Q14872 753 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 MEA1Q16626 185 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 DENND1BQ6P3S1 775 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 TXNDC11Q6PKC3 985 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 ZNF276Q8N554 614 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 DTWD2Q8NBA8 298 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 ZNF606Q8WXB4 792 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 SECISBP2LQ93073 1101 aaKnown RBP18.34■□□□□ 0.53
CTSD-203ENST00000429746 CPQQ9Y646 472 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 VPS13AQ96RL7 3174 aa18.34■□□□□ 0.53
CTSD-203ENST00000429746 TLR5O60602 858 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 KRT5P13647 590 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 ARSAP15289 507 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 TKTL1P51854 596 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 MLLT6P55198 1093 aaPredicted RBP18.33■□□□□ 0.52
CTSD-203ENST00000429746 GAB4Q2WGN9 574 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 EML3Q32P44 896 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 ZSCAN23Q3MJ62 389 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 HECTD3Q5T447 861 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 TPRG1Q6ZUI0 275 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 SCML4Q8N228 414 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 WDTC1Q8N5D0 677 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 FAM81BQ96LP2 452 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 LSM14BQ9BX40 385 aaKnown RBP18.33■□□□□ 0.52
CTSD-203ENST00000429746 OSBPL6Q9BZF3 934 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 ULBP1Q9BZM6 244 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 GKN1Q9NS71 199 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 SIT1Q9Y3P8 196 aa18.33■□□□□ 0.52
CTSD-203ENST00000429746 M0QYV0 167 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 DPYSL4O14531 572 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 TARSP26639 723 aaKnown RBP18.32■□□□□ 0.52
CTSD-203ENST00000429746 ZNF165P49910 485 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 JAM2P57087 298 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 DRAP1Q14919 205 aaPredicted RBP18.32■□□□□ 0.52
CTSD-203ENST00000429746 STILQ15468 1287 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 KLHDC10Q6PID8 442 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 PJA1Q8NG27 643 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 OSCP1Q8WVF1 389 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 ERGIC2Q96RQ1 377 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 NELL2Q99435 816 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 PHOX2BQ99453 314 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 KLF16Q9BXK1 252 aaPredicted RBP18.32■□□□□ 0.52
CTSD-203ENST00000429746 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 LINC00597Q9H2U6 94 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 CBX8Q9HC52 389 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 LTB4R2Q9NPC1 389 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 TLR8Q9NR97 1041 aaKnown RBP18.32■□□□□ 0.52
CTSD-203ENST00000429746 SMPD4Q9NXE4 827 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 CLIC5Q9NZA1 410 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 HESX1Q9UBX0 185 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 NUDT5Q9UKK9 219 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 WNT6Q9Y6F9 365 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 KIAA1549LQ6ZVL6 1849 aa18.32■□□□□ 0.52
CTSD-203ENST00000429746 KANSL1LA0AUZ9 987 aa18.31■□□□□ 0.52
CTSD-203ENST00000429746 MDM4O15151 490 aa18.31■□□□□ 0.52
CTSD-203ENST00000429746 LETM1O95202 739 aaPredicted RBP18.31■□□□□ 0.52
CTSD-203ENST00000429746 ABL1P00519 1130 aa18.31■□□□□ 0.52
CTSD-203ENST00000429746 PTMSP20962 102 aa18.31■□□□□ 0.52
CTSD-203ENST00000429746 GNA15P30679 374 aa18.31■□□□□ 0.52
CTSD-203ENST00000429746 MAGEA9P43362 315 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms