RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TFDP2Q14188 446 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 TMEM132BQ14DG7 1078 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 MAPK6Q16659 721 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 KYAT1Q16773 422 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF699Q32M78 642 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 WDR72Q3MJ13 1102 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 C2CD6Q53TS8 623 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 LLGL2Q6P1M3 1020 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 C3orf62Q6ZUJ4 267 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 FAM47EQ6ZV65 393 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ENDOVQ8N8Q3 282 aaKnown RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 CMASQ8NFW8 434 aaPredicted RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ERP27Q96DN0 273 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ZBTB45Q96K62 511 aaPredicted RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 NECAB3Q96P71 396 aaPredicted RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ACO2Q99798 780 aaKnown RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 TCHPQ9BT92 498 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 MAK16Q9BXY0 300 aaKnown RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 TRIM55Q9BYV6 548 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 RNPEPL1Q9HAU8 725 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 CYP3A43Q9HB55 503 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 PNPLA8Q9NP80 782 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ZFP69BQ9UJL9 534 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 CPSF3Q9UKF6 684 aaKnown RBP9.08□□□□□ -0.96
GABPB1-205ENST00000429662 CHKBQ9Y259 395 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 IKBKGQ9Y6K9 419 aa9.08□□□□□ -0.96
GABPB1-205ENST00000429662 ARID2Q68CP9 1835 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MYO15AQ9UKN7 3530 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 LOC102724159A0A0B4J2E5 919 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CXCL11O14625 94 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 TRDMT1O14717 391 aaKnown RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 KLF11O14901 512 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CST8O60676 142 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MSCO60682 206 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CCDC22O60826 627 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 DNAJC6O75061 913 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CST3P01034 146 aaPredicted RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 IFNB1P01574 187 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MT-ND3P03897 115 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 ZSCAN5DPP0CG00 497 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 KRT4P19013 534 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 BRD2P25440 801 aaKnown RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MARK3P27448 753 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 RPL22P35268 128 aaKnown RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 GCKP35557 465 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 GABRB2P47870 512 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 GPX6P59796 221 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MYL6P60660 151 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 OTUD4Q01804 1114 aaKnown RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SLC25A11Q02978 314 aaKnown RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SLC18A2Q05940 514 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SF3A3Q12874 501 aaKnown RBP eCLIP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CAPSQ13938 189 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 KRT72Q14CN4 511 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 PWP2Q15269 919 aaKnown RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SLC1A5Q15758 541 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 FAM110CQ1W6H9 321 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 ATP13A4Q4VNC1 1196 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 FAM91A1Q658Y4 838 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 NLRP9Q7RTR0 991 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 OTOAQ7RTW8 1153 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MAP7D3Q8IWC1 876 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 ARHGAP24Q8N264 748 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 KIF2BQ8N4N8 673 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 WDTC1Q8N5D0 677 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 BANPQ8N9N5 519 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SLC4A11Q8NBS3 891 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 KCTD6Q8NC69 237 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 ACTL9Q8TC94 416 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SEPT1Q8WYJ6 367 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CPT1BQ92523 772 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 ASB2Q96Q27 587 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 PAFAH2Q99487 392 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 TMEM121Q9BTD3 319 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 MANSC1Q9H8J5 431 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 IFT122Q9HBG6 1241 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
GABPB1-205ENST00000429662 GGT7Q9UJ14 662 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 KIAA1257Q9ULG3 409 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 AFG3L2Q9Y4W6 797 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 LRRC42Q9Y546 428 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 CLUHO75153 1309 aa9.07□□□□□ -0.96
GABPB1-205ENST00000429662 SIP14410 1827 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 CHADO15335 359 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 FAM189A1O60320 539 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 DIAPH2O60879 1101 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 LRCH4O75427 683 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 PRKCBP05771 671 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 ETS1P14921 441 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 PROZP22891 400 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SLC26A2P50443 739 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SNX16P57768 344 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 EIF3EP60228 445 aaKnown RBP9.06□□□□□ -0.96
GABPB1-205ENST00000429662 PSMC1P62191 440 aaKnown RBP9.06□□□□□ -0.96
GABPB1-205ENST00000429662 OGDHQ02218 1023 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 SP4Q02446 784 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 TNFAIP2Q03169 654 aa9.06□□□□□ -0.96
GABPB1-205ENST00000429662 DPYSL3Q14195 570 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms