RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 F8VP50 259 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 SPDYAQ5MJ70 313 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 ACAD11Q709F0 780 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 NUDCD3Q8IVD9 361 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 SLC35C1Q96A29 364 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 FAM161BQ96MY7 647 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 UBP1Q9NZI7 540 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 RAB23Q9ULC3 237 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 HSPA8P11142 646 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 GTF2BQ00403 316 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 SNX31Q8N9S9 440 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 GLIS3Q8NEA6 775 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 FBXO22Q8NEZ5 403 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 GOLGA2P5Q9HBQ8 144 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 COL1A2P08123 1366 aa17.71■□□□□ 0.42
SMARCA4-203ENST00000429416 ALDH1A2O94788 518 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 DDR2Q16832 855 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 SYDE1Q6ZW31 735 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 KAT2BQ92831 832 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 PCDHGB4Q9UN71 923 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 DLG4P78352 724 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 CLEC16AQ2KHT3 1053 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 DSG4Q86SJ6 1040 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 E5RJQ4 531 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 SPAG7O75391 227 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 GCNT1Q02742 428 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 FPGSQ05932 587 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 MARC1Q5VT66 337 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 KIAA1324Q6UXG2 1013 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 GET4Q7L5D6 327 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 ZNF296Q8WUU4 475 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 RBM22Q9NW64 420 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 RRN3Q9NYV6 651 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 CDH9Q9ULB4 789 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 PAEPP09466 180 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 GZMAP12544 262 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 BRAFP15056 766 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 VCLP18206 1134 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 IFNA8P32881 189 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 PLCL1Q15111 1095 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 PPP4R4Q6NUP7 873 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 MYLPFQ96A32 169 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 ZFP42Q96MM3 310 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 SPATA16Q9BXB7 569 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 EPS15L1Q9UBC2 864 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 LGR5O75473 907 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 ERAP2Q6P179 960 aa17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 AAR2Q9Y312 384 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-203ENST00000429416 DIAPH2O60879 1101 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 SESN3P58005 492 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 NAA25Q14CX7 972 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 CLEC4DQ8WXI8 215 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 SKA1Q96BD8 255 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 PACSIN1Q9BY11 444 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 PITPNM3Q9BZ71 974 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 PPARGC1AQ9UBK2 798 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 PSTPIP1O43586 416 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 TBCCQ15814 346 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 B3GALNT2Q8NCR0 500 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 SMG7Q92540 1137 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 ADGRE3Q9BY15 652 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 ABCC13Q9NSE7 274 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 CDY1Q9Y6F8 540 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 GABRR2P28476 465 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 GRM5P41594 1212 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 LPCAT1Q8NF37 534 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 TPCN2Q8NHX9 752 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 FAM136AQ96C01 138 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 POPDC2Q9HBU9 364 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 RNF186Q9NXI6 227 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 INTUQ9ULD6 942 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 APOBEC2Q9Y235 224 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 GTPBP10A4D1E9 387 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 SUPT3HB4E1H0 165 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 SUPT3HO75486 399 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 PHEXP78562 749 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 PTK6Q13882 451 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
SMARCA4-203ENST00000429416 LOC102724159A0A0B4J2E5 919 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 SPATA31C1P0DKV0 1188 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 CCND3P30281 292 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 RTP1P59025 263 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 TFDP3Q5H9I0 405 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 ATAT1Q5SQI0 421 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 ERMARDQ5T6L9 678 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 C11orf96Q7Z7L8 435 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 UBE2Q2Q8WVN8 375 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 TKTL2Q9H0I9 626 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 ALG13Q9NP73 1137 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 PCDHA2Q9Y5H9 948 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 CLTBP09497 229 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 MFSD4BQ5TF39 518 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 LRRC1Q9BTT6 524 aa17.68■□□□□ 0.42
SMARCA4-203ENST00000429416 BRD9Q9H8M2 597 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms