RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 BMPR1AP36894 532 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 SCNN1AP37088 669 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 SSR1P43307 286 aaKnown RBP9.3□□□□□ -0.92
SMC6-204ENST00000428868 MAGEA11P43364 429 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 ZNF143P52747 638 aaPredicted RBP9.3□□□□□ -0.92
SMC6-204ENST00000428868 SLC8A3P57103 927 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 TAP1Q03518 808 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 C2orf54Q08AI8 447 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 SMTNL2Q2TAL5 461 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 MGAT5BQ3V5L5 792 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 KIAA1841Q6NSI8 718 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 SCD5Q86SK9 330 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 ZDHHC17Q8IUH5 632 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 ZDHHC14Q8IZN3 488 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 ADAM32Q8TC27 787 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 FNIP1Q8TF40 1166 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 GIPC2Q8TF65 315 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 FAM172AQ8WUF8 416 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 EDEM1Q92611 657 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 FAM149B1Q96BN6 582 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMC6-204ENST00000428868 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
SMC6-204ENST00000428868 SLC2A13Q96QE2 648 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 CNPY3Q9BT09 278 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 DDX23Q9BUQ8 820 aaKnown RBP9.3□□□□□ -0.92
SMC6-204ENST00000428868 UBXN6Q9BZV1 441 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 ZWILCHQ9H900 591 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 NMUR1Q9HB89 426 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 CNGB3Q9NQW8 809 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 GPATCH2LQ9NWQ4 482 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 OSER1Q9NX31 292 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PCSK1NQ9UHG2 260 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 NAALADL1Q9UQQ1 740 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 NR2E1Q9Y466 385 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PCDHB12Q9Y5F1 795 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 PCDHA3Q9Y5H8 950 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 MYOFQ9NZM1 2061 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 CHD5Q8TDI0 1954 aa9.3□□□□□ -0.92
SMC6-204ENST00000428868 A0A0C4DFX4 3053 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 SYNJ2BP-COX16A0A087WUM0 186 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 A0A1W2PQH9 124 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 GRM6O15303 877 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 TEX28O15482 410 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PSTPIP1O43586 416 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 HSF2BPO75031 334 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 TADA3O75528 432 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 ABLIM3O94929 683 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 FBXO21O94952 628 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 SLU7O95391 586 aaKnown RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 TRUB2O95900 331 aaKnown RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 LTFP02788 710 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 CD48P09326 243 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 CNPP09543 421 aaKnown RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 SPATA31D3P0C874 917 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 CTSAP10619 480 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PRLRP16471 622 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 CA8P35219 290 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 IRS1P35568 1242 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 SLC1A1P43005 524 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PTPN9P43378 593 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 SULT1E1P49888 294 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 HDAC4P56524 1084 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 CAMK1Q14012 370 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PIGHQ14442 188 aaPredicted RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 CA9Q16790 459 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 WHAMMP3Q1A5X7 153 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 KCNT1Q5JUK3 1230 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 EFHC1Q5JVL4 640 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PLPP4Q5VZY2 271 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PM20D1Q6GTS8 502 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 VSTM1Q6UX27 236 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 SPATA31D4Q6ZUB0 917 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 BNIPLQ7Z465 357 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 ADAT2Q7Z6V5 191 aaKnown RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 RASGEF1CQ8N431 466 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 NOA1Q8NC60 698 aaKnown RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 SPPL3Q8TCT6 385 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 SPPL2BQ8TCT7 592 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 C8orf48Q96LL4 319 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 GDF15Q99988 308 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 EPC1Q9H2F5 836 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 CERS4Q9HA82 394 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 PNPLA8Q9NP80 782 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 NGRNQ9NPE2 291 aaKnown RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 AAASQ9NRG9 546 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMC6-204ENST00000428868 COX16Q9P0S2 106 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 GMIPQ9P107 970 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 NUDT5Q9UKK9 219 aa9.29□□□□□ -0.92
SMC6-204ENST00000428868 KIF26AQ9ULI4 1882 aaPredicted RBP9.29□□□□□ -0.92
SMC6-204ENST00000428868 LAMA3Q16787 3333 aa9.28□□□□□ -0.92
SMC6-204ENST00000428868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.28□□□□□ -0.92
SMC6-204ENST00000428868 CCDC66A2RUB6 948 aa9.28□□□□□ -0.92
SMC6-204ENST00000428868 C3orf70A6NLC5 250 aaPredicted RBP9.28□□□□□ -0.92
SMC6-204ENST00000428868 SLC38A8A6NNN8 435 aa9.28□□□□□ -0.92
SMC6-204ENST00000428868 MIF4GDA9UHW6 222 aaKnown RBP9.28□□□□□ -0.92
SMC6-204ENST00000428868 I6L893 689 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms