RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 PYROXD2Q8N2H3 581 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 MICALL1Q8N3F8 863 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 RXFP2Q8WXD0 754 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 UBXN4Q92575 508 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 FAM81BQ96LP2 452 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 PEBP4Q96S96 227 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 SELENOOQ9BVL4 669 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CARD6Q9BX69 1037 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 EPC1Q9H2F5 836 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 PRDM12Q9H4Q4 367 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCSER2Q9H7U1 834 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 NGRNQ9NPE2 291 aaKnown RBP9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 GMIPQ9P107 970 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 DSEQ9UL01 958 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 MRFAP1Q9Y605 127 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 MYOFQ9NZM1 2061 aa9.99□□□□□ -0.81
HMGCLL1-206ENST00000428842 A0A1W2PQH9 124 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 TCRBV7S2A1N4TA0A589 114 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 PRRG1O14668 218 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 XPO1O14980 1071 aaKnown RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 KIF5CO60282 957 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 LILRB3O75022 631 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 PLA2G4AP47712 749 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 TWF1Q12792 350 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 PLEKHA7Q6IQ23 1121 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC8B1Q6J4K2 584 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 POTEHQ6S545 545 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 SCD5Q86SK9 330 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM110Q86TL2 294 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 MIB1Q86YT6 1006 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 DEFB106AQ8N104 65 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 SIX6OS1Q8N1H7 587 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 MNS1Q8NEH6 495 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZNF461Q8TAF7 563 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC22A12Q96S37 553 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 DMAP1Q9NPF5 467 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 TLR9Q9NR96 1032 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 XPO7Q9UIA9 1087 aaKnown RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 NR2E1Q9Y466 385 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 PCDHB5Q9Y5E4 795 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 HCFC2Q9Y5Z7 792 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 CTSAP10619 480 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 NCAM1P13591 858 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 PDGFRAP16234 1089 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 NRIP1P48552 1158 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 TAF10Q12962 218 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 PLD1Q13393 1074 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 CBX2Q14781 532 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCDC14Q49A88 953 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 OTUD1Q5VV17 481 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 FAM131BQ86XD5 332 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 VN1R2Q8NFZ6 395 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 NOX5Q96PH1 765 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 HEMGNQ9BXL5 484 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZNF334Q9HCZ1 680 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 SAE1Q9UBE0 346 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 NUP205Q92621 2012 aa9.98□□□□□ -0.81
HMGCLL1-206ENST00000428842 C2orf78A6NCI8 922 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 PDE2AO00408 941 aaPredicted RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 LPXNO60711 386 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 LSM8O95777 96 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZBED1O96006 694 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 ATF2P15336 505 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 PSMA2P25787 234 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 FAM193AP78312 1265 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 SLC6A3Q01959 620 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CLUL1Q15846 466 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CA9Q16790 459 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZC3H12AQ5D1E8 599 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 RSRC2Q7L4I2 434 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 MRPL43Q8N983 215 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 PHOSPHO2Q8TCD6 241 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 KLHL5Q96PQ7 755 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TGS1Q96RS0 853 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TBCBQ99426 244 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TTYH1Q9H313 450 aaPredicted RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 C10orf88Q9H8K7 445 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CSNK1G1Q9HCP0 422 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMEM59LQ9UK28 342 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 NCANO14594 1321 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 SPOPO43791 374 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCR2P41597 374 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 DAOAP59103 153 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 MRPS5P82675 430 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CYP4F8P98187 520 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TERF2Q15554 542 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CFAP221Q4G0U5 840 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZFYVE27Q5T4F4 411 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TMC5Q6UXY8 1006 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 CCDC185Q8N715 623 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 C3orf20Q8ND61 904 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 WBP2Q969T9 261 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 RNF25Q96BH1 459 aaPredicted RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 TCEAL4Q96EI5 215 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 MCRS1Q96EZ8 462 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 MTIF3Q9H2K0 278 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms