RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GUCA1BQ9UMX6 200 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCML2Q9UQR0 700 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 PAXBP1Q9Y5B6 917 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 DUSP10Q9Y6W6 482 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 COL6A3P12111 3177 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 A0A0A6YYK5 440 aaPredicted RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 TCRBV5S1A1TA0A578 114 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 SIGLEC16A6NMB1 481 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 YJEFN3A6XGL0 299 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 BTNL10A8MVZ5 291 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 E7ENQ6 273 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 CAPN9O14815 690 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 KIF5CO60282 957 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 MOCS3O95396 460 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 ABL1P00519 1130 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 LTFP02788 710 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 GLI1P08151 1106 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 MYL4P12829 197 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 GPD1P21695 349 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 PSMA2P25787 234 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 HOXA9P31269 272 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 SDC4P31431 198 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 RFC1P35251 1148 aaPredicted RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 RPL7AP62424 266 aaKnown RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 YWHAZP63104 245 aaKnown RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 TAF10Q12962 218 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 ADGRE1Q14246 886 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 BTBD8Q5XKL5 378 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 PM20D1Q6GTS8 502 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZNF662Q6ZS27 426 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 EP400NLQ6ZTU2 488 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 RTL10Q7L3V2 364 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 BHLHA9Q7RTU4 235 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 DNAJB7Q7Z6W7 309 aaPredicted RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 REXO1L1PQ8IX06 675 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 EFHBQ8N7U6 833 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 VN1R2Q8NFZ6 395 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 JOSD2Q8TAC2 188 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 FEZF2Q8TBJ5 459 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 HDAC7Q8WUI4 952 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 EDEM1Q92611 657 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 ALS2CR12Q96Q35 445 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 CORO1BQ9BR76 489 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRIM7Q9C029 511 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 NACA2Q9H009 215 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 FAM204AQ9H8W3 233 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 PIDD1Q9HB75 910 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 NMUR1Q9HB89 426 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 TLR8Q9NR97 1041 aaKnown RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 ASNSD1Q9NWL6 643 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 COMMD8Q9NX08 183 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 UXTQ9UBK9 157 aaPredicted RBP8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 COG5Q9UP83 839 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 ASB3Q9Y575 518 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 USP3Q9Y6I4 520 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 LAMA3Q16787 3333 aa8.29□□□□□ -1.08
HMGA1P4-201ENST00000428643 TMEM191CA6NGB0 347 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MYO1FO00160 1098 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 LINC01565O15544 149 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 BUB1BO60566 1050 aaPredicted RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MTA2O94776 668 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 NCAM1P13591 858 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 PDGFRAP16234 1089 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 HMGA1P17096 107 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 FLT3P36888 993 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MATKP42679 507 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SSR1P43307 286 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 PSEN1P49768 467 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SULT1E1P49888 294 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MESDQ14696 234 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TCEAL1Q15170 157 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 DCAF6Q58WW2 860 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 RARS2Q5T160 578 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 BSPRYQ5W0U4 402 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 PDZD4Q76G19 769 aaPredicted RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCD5Q86SK9 330 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 DAAM2Q86T65 1068 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MON1AQ86VX9 555 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 DEFB106AQ8N104 65 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCML4Q8N228 414 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 RNF10Q8N5U6 811 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 C12orf76Q8N812 135 aaPredicted RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TPCN2Q8NHX9 752 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 RNF139Q8WU17 664 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 RXFP2Q8WXD0 754 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SMG7Q92540 1137 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 BTBD6Q96KE9 485 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MYRFLQ96LU7 910 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 CFAP57Q96MR6 1250 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC2A13Q96QE2 648 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TTLL2Q9BWV7 592 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms