RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ALLCQ8N6M5 410 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 IL17RCQ8NAC3 791 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 PDZD8Q8NEN9 1154 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 MDGA1Q8NFP4 955 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 TSTD1Q8NFU3 115 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 TAS1R2Q8TE23 839 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 OSER1Q9NX31 292 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 HCN2Q9UL51 889 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 MMP17Q9ULZ9 603 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 NUP205Q92621 2012 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 THADAQ6YHU6 1953 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 ATP8B3O60423 1300 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 MAP1BP46821 2468 aaKnown RBP16.43■□□□□ 0.22
SEC13-210ENST00000428626 A0A0A0MRY4 1105 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 SGK1O00141 431 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 SLC9A3R1O14745 358 aaPredicted RBP16.43■□□□□ 0.22
SEC13-210ENST00000428626 TRIM24O15164 1050 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 KAT7O95251 611 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 MYL1P05976 194 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 ADRB1P08588 477 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 ADH5P11766 374 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 ADORA2BP29275 332 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 PIK3CAP42336 1068 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 GCLMP48507 274 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 VAMP7P51809 220 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 KRT85P78386 507 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 CRY1Q16526 586 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 AASDHQ4L235 1098 aaPredicted RBP16.43■□□□□ 0.22
SEC13-210ENST00000428626 ZCWPW2Q504Y3 356 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 ANO7Q6IWH7 933 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 CLEC20AQ6ZU45 233 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 UNC93AQ86WB7 457 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 ETFBKMTQ8IXQ9 262 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 TAF4BQ92750 862 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 PNKPQ96T60 521 aa16.43■□□□□ 0.22
SEC13-210ENST00000428626 MAPK13O15264 365 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 CALUO43852 315 aaPredicted RBP16.42■□□□□ 0.22
SEC13-210ENST00000428626 ADAM23O75077 832 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 KLF8O95600 359 aaPredicted RBP16.42■□□□□ 0.22
SEC13-210ENST00000428626 IRF1P10914 325 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 NR2F2P24468 414 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 TIE1P35590 1138 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 EIF2DP41214 584 aaKnown RBP16.42■□□□□ 0.22
SEC13-210ENST00000428626 TUBP50607 506 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 LIMK1P53667 647 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 INCA1Q0VD86 236 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 NFIL3Q16649 462 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 KRBA2Q6ZNG9 492 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 DDX42Q86XP3 938 aaKnown RBP eCLIP16.42■□□□□ 0.22
SEC13-210ENST00000428626 TMEM25Q86YD3 366 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 FRMD1Q8N878 549 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 NAT16Q8N8M0 369 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 TXNDC5Q8NBS9 432 aaKnown RBP16.42■□□□□ 0.22
SEC13-210ENST00000428626 P2RY11Q96G91 374 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
SEC13-210ENST00000428626 NMUR1Q9HB89 426 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 ARHGEF4Q9NR80 690 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 COMMD8Q9NX08 183 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 TBC1D14Q9P2M4 693 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 FRMD4BQ9Y2L6 1034 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 PCDHGA5Q9Y5G8 931 aa16.42■□□□□ 0.22
SEC13-210ENST00000428626 BCLAF3A2AJT9 711 aaKnown RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 CYP26A1O43174 497 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 TLR5O60602 858 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 ADH1CP00326 375 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 P4HA1P13674 534 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 MRPS21P82921 87 aaKnown RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 STPG1Q5TH74 334 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 PMS2CLQ68D20 193 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 SMYD4Q8IYR2 804 aaPredicted RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 GUF1Q8N442 669 aaKnown RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 OLIG1Q8TAK6 271 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 RLN3Q8WXF3 142 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 SEMA4DQ92854 862 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 JAKMIP2Q96AA8 810 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 EEF2KMTQ96G04 330 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 HNRNPABQ99729 332 aaKnown RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 KLF16Q9BXK1 252 aaPredicted RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 NUDT5Q9UKK9 219 aa16.41■□□□□ 0.22
SEC13-210ENST00000428626 KMT2BQ9UMN6 2715 aaPredicted RBP16.41■□□□□ 0.22
SEC13-210ENST00000428626 MDM4O15151 490 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 HOXC11O43248 304 aaPredicted RBP16.4■□□□□ 0.22
SEC13-210ENST00000428626 FOXD2O60548 495 aaPredicted RBP16.4■□□□□ 0.22
SEC13-210ENST00000428626 CILPO75339 1184 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 TULP3O75386 442 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 APODP05090 189 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 GBP1P32455 592 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 GRIA2P42262 883 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 MCCD1P59942 119 aaPredicted RBP16.4■□□□□ 0.22
SEC13-210ENST00000428626 CREB5Q02930 508 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 FAM186BQ8IYM0 893 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 CYFIP2Q96F07 1278 aa16.4■□□□□ 0.22
SEC13-210ENST00000428626 DUSP9Q99956 384 aaKnown RBP16.4■□□□□ 0.22
SEC13-210ENST00000428626 CYLDQ9NQC7 956 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms