RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 COX16Q9P0S2 106 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
HDAC9-210ENST00000428307 SCN10AQ9Y5Y9 1956 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 XPO1O14980 1071 aaKnown RBP10.86□□□□□ -0.67
HDAC9-210ENST00000428307 MCF2LO15068 1137 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 EIF3HO15372 352 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDAC9-210ENST00000428307 NPR3P17342 541 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 DESP17661 470 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 MDH1P40925 334 aaKnown RBP10.86□□□□□ -0.67
HDAC9-210ENST00000428307 ACADSBP45954 432 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 PPP2R2AP63151 447 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 CCDC38Q502W7 563 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 DCAF6Q58WW2 860 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 C6orf118Q5T5N4 469 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 EMC10Q5UCC4 262 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 DARS2Q6PI48 645 aaKnown RBP10.86□□□□□ -0.67
HDAC9-210ENST00000428307 RNF180Q86T96 592 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 ZCCHC9Q8N567 271 aaKnown RBP10.86□□□□□ -0.67
HDAC9-210ENST00000428307 ARFGAP2Q8N6H7 521 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 MDM1Q8TC05 714 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 BCAS4Q8TDM0 211 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 PGM2Q96G03 612 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 KCNK16Q96T55 309 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
HDAC9-210ENST00000428307 PCDH9Q9HC56 1237 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 PCDH18Q9HCL0 1135 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 SAYSD1Q9NPB0 183 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 CRTAC1Q9NQ79 661 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 CALCOCO1Q9P1Z2 691 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
HDAC9-210ENST00000428307 LSP1P33241 339 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 RPL22P35268 128 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 MAGEA4P43358 317 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 ACLYP53396 1101 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 GAD2Q05329 585 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 FASTKD3Q14CZ7 662 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 UPP1Q16831 310 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 TIGD5Q53EQ6 642 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 ANKRD20A8PQ5CZ79 823 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 ERMARDQ5T6L9 678 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 CLEC20AQ6ZU45 233 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 DEFB106AQ8N104 65 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PLD5Q8N7P1 536 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PCDH19Q8TAB3 1148 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 RAET1EQ8TD07 263 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 TLCD1Q96CP7 247 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 TBCBQ99426 244 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 TRPV6Q9H1D0 765 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 LRRC4Q9HBW1 653 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 DDX20Q9UHI6 824 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PRDM4Q9UKN5 801 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 A0A0U1RQF3 1178 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 FOXO6A8MYZ6 492 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 H7C0C1 242 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 BRCC3P46736 316 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 ATP5OP48047 213 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 RPL34P49207 117 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 SEC24CP53992 1094 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 BCAR1P56945 870 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PITX1P78337 314 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 AUHQ13825 339 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 TFDP2Q14188 446 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PDK2Q15119 407 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 EFHC1Q5JVL4 640 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 RNASEH2BQ5TBB1 312 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 MRPL10Q7Z7H8 261 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 FAM131BQ86XD5 332 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 CCDC33Q8N5R6 958 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 CCDC185Q8N715 623 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PQLC3Q8N755 202 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 SYT15Q9BQS2 421 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 PPANQ9NQ55 473 aaKnown RBP10.85□□□□□ -0.67
HDAC9-210ENST00000428307 CTNNAL1Q9UBT7 734 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 TBK1Q9UHD2 729 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 SLC12A6Q9UHW9 1150 aa10.85□□□□□ -0.67
HDAC9-210ENST00000428307 F8W810 466 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 ZNF623O75123 536 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 BANF1O75531 89 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 FAM200BP0CF97 657 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 CST5P28325 142 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 PTPN9P43378 593 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 LHX1P48742 406 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 TKTL1P51854 596 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 ADCY1Q08828 1119 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 PTK7Q13308 1070 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 MORF4L2Q15014 288 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 ANKRD22Q5VYY1 191 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 CTU1Q7Z7A3 348 aaKnown RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 ZBED8Q8IZ13 594 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 SIX6OS1Q8N1H7 587 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 PYROXD2Q8N2H3 581 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms