RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SRRTQ9BXP5 876 aaKnown RBP9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 NUP62CLQ9H1M0 184 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 FBXO44Q9H4M3 255 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CCSER2Q9H7U1 834 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 LMAN1LQ9HAT1 526 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CSNK1G1Q9HCP0 422 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CFAP97Q9P2B7 532 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 R4GN57 208 aa9.74□□□□□ -0.85
RFX3-AS1-202ENST00000427722 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 HHLA1C9JL84 531 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 GFRA3O60609 400 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 FGFR1OPO95684 399 aaKnown RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 GNA14O95837 355 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 SP9P0CG40 484 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CCDC192P0DO97 292 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CHRNB1P11230 501 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CD19P15391 556 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TCF3P15923 654 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ACO1P21399 889 aaKnown RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TBXAS1P24557 533 aaPredicted RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 PGFP49763 221 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 YWHAEP62258 255 aaKnown RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ZXDBP98169 803 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CSTF1Q05048 431 aaKnown RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CETN1Q12798 172 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 GOLGA7BQ2TAP0 167 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 EML3Q32P44 896 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 HECTD3Q5T447 861 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 NAIF1Q69YI7 327 aaPredicted RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TSSK4Q6SA08 328 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CREBRFQ8IUR6 639 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TRIM59Q8IWR1 403 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 MAML2Q8IZL2 1156 aaPredicted RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 PPM1KQ8N3J5 372 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 KAT5Q92993 513 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ATP2A3Q93084 1043 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CHFRQ96EP1 664 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TMEM176AQ96HP8 235 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CNOT6LQ96LI5 555 aaKnown RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 RNF38Q9H0F5 515 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ECT2Q9H8V3 914 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 PRMT8Q9NR22 394 aaPredicted RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 COMMD8Q9NX08 183 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 IL37Q9NZH6 218 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 CHORDC1Q9UHD1 332 aaPredicted RBP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 RWDD2AQ9UIY3 292 aa9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.73□□□□□ -0.85
RFX3-AS1-202ENST00000427722 A0A1W2PQH9 124 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 FAM92AA1XBS5 289 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TLR5O60602 858 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 NFATC1O95644 943 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 AFPP02771 609 aaKnown RBP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ZDHHC11BP0C7U3 371 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 IRF1P10914 325 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 GCGRP47871 477 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TUBP50607 506 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 KCNH2Q12809 1159 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 GRSF1Q12849 480 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 DPCR1Q3MIW9 517 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ARHGAP17Q68EM7 881 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 FSTL4Q6MZW2 842 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 ZC3H14Q6PJT7 736 aaKnown RBP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 PIGZQ86VD9 579 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TTC30AQ86WT1 665 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 DDX42Q86XP3 938 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 MLKLQ8NB16 471 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 NKD2Q969F2 451 aaPredicted RBP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 GBP4Q96PP9 640 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 IER2Q9BTL4 223 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 DUSP16Q9BY84 665 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 INTS2Q9H0H0 1204 aaKnown RBP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 LINC00597Q9H2U6 94 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 FAM124BQ9H5Z6 455 aaPredicted RBP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 PNPLA8Q9NP80 782 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 TLR8Q9NR97 1041 aaKnown RBP9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 FBXO4Q9UKT5 387 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 SCML2Q9UQR0 700 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 COL4A2P08572 1712 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 F5P12259 2224 aa9.72□□□□□ -0.85
RFX3-AS1-202ENST00000427722 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PROB1E7EW31 1015 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 MDM4O15151 490 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 PMM2O15305 246 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 P4HA2O15460 535 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 EGFP01133 1207 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CYP17A1P05093 508 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GJA4P35212 333 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CCR3P51677 355 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 KIF11P52732 1056 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 BCAT1P54687 386 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 MARSP56192 900 aaKnown RBP9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SLC8A3P57103 927 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 AMPD2Q01433 879 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SATB1Q01826 763 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 CCINQ13939 588 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 GAS6Q14393 721 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 TPD52L1Q16890 204 aaPredicted RBP9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 SGO2Q562F6 1265 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 TMEM196Q5HYL7 178 aa9.71□□□□□ -0.86
RFX3-AS1-202ENST00000427722 DGKKQ5KSL6 1271 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms