RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 CPLX3Q8WVH0 158 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 EDAQ92838 391 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
SMIM12-203ENST00000426886 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 TJP2Q9UDY2 1190 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 CPQQ9Y646 472 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 FAM92AA1XBS5 289 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 DYNC1I1O14576 645 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 STAT1P42224 750 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 PPP3CCP48454 512 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 PDE6CP51160 858 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 BPIFB4P59827 614 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 CELF5Q8N6W0 485 aaKnown RBP13.18□□□□□ -0.3
SMIM12-203ENST00000426886 C1orf131Q8NDD1 294 aaKnown RBP13.18□□□□□ -0.3
SMIM12-203ENST00000426886 SLC20A1Q8WUM9 679 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
SMIM12-203ENST00000426886 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 YJEFN3A6XGL0 299 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 E7ENQ6 273 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 STK25O00506 426 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
SMIM12-203ENST00000426886 UQCRHP07919 91 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 MMEP08473 750 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 RARGP13631 454 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 JAM2P57087 298 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 TNK2Q07912 1038 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 HFE2Q6ZVN8 426 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 BPIFB1Q8TDL5 484 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 SH3RF2Q8TEC5 729 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 TRPV4Q9HBA0 871 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 DUSP12Q9UNI6 340 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
SMIM12-203ENST00000426886 ZDHHC11BP0C7U3 371 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 IRF1P10914 325 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 SRFP11831 508 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 RSRC2Q7L4I2 434 aaKnown RBP13.17□□□□□ -0.3
SMIM12-203ENST00000426886 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
SMIM12-203ENST00000426886 COMMD8Q9NX08 183 aa13.17□□□□□ -0.3
SMIM12-203ENST00000426886 GREB1Q4ZG55 1949 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 E5RJQ4 531 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 ZNF263O14978 683 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
SMIM12-203ENST00000426886 CD72P21854 359 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMIM12-203ENST00000426886 SIX5Q8N196 739 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 KCTD13Q8WZ19 329 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 CPXM1Q96SM3 734 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 GTSE1Q9NYZ3 720 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
SMIM12-203ENST00000426886 ZDBF2Q9HCK1 2354 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 HMBSP08397 361 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
SMIM12-203ENST00000426886 EFEMP1Q12805 493 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 PDCLQ13371 301 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 CC2D1AQ6P1N0 951 aaPredicted RBP13.16□□□□□ -0.3
SMIM12-203ENST00000426886 TRIM67Q6ZTA4 783 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 UBALD2Q8IYN6 164 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 CPA5Q8WXQ8 436 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 FAM149B1Q96BN6 582 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 HSFY1Q96LI6 401 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 SYNCQ9H7C4 482 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 HEBP1Q9NRV9 189 aa13.16□□□□□ -0.3
SMIM12-203ENST00000426886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMIM12-203ENST00000426886 TECTAO75443 2155 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 LRRC53A6NM62 1247 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 LEFTY2O00292 366 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 SIGLEC14Q08ET2 396 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 PM20D1Q6GTS8 502 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
SMIM12-203ENST00000426886 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
SMIM12-203ENST00000426886 ASIC4Q96FT7 647 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 LINC00597Q9H2U6 94 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 EBF3Q9H4W6 596 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 ZMYM5Q9UJ78 669 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 CEP83Q9Y592 693 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 RALAP11233 206 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 DAOAP59103 153 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 MTF1Q14872 753 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 TAF5Q15542 800 aa13.15□□□□□ -0.3
SMIM12-203ENST00000426886 SNX30Q5VWJ9 437 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms