RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 BICDL2A1A5D9 508 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 TRIM24O15164 1050 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 PMM2O15305 246 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 LILRB5O75023 590 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 CYP17A1P05093 508 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 IRF1P10914 325 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 PFKLP17858 780 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 MAGEA9P43362 315 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 PDE4CQ08493 712 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 DHCR24Q15392 516 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 GOLGA7BQ2TAP0 167 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 BBS7Q8IWZ6 715 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 ZBTB44Q8NCP5 570 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 PDZD8Q8NEN9 1154 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 FAXDC2Q96IV6 333 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 P2RY13Q9BPV8 354 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 ACP6Q9NPH0 428 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 EHD2Q9NZN4 543 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 RWDD2AQ9UIY3 292 aa13.44□□□□□ -0.26
GPC1-204ENST00000426280 HELZP42694 1942 aaKnown RBP13.44□□□□□ -0.26
GPC1-204ENST00000426280 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 K7EQS6 105 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 TLR5O60602 858 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
GPC1-204ENST00000426280 RARGP13631 454 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 SLC9A1P19634 815 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 PTMSP20962 102 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 CXCL12P48061 93 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 PXNP49023 591 aaPredicted RBP13.43□□□□□ -0.26
GPC1-204ENST00000426280 FNTBP49356 437 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 ZNF528Q3MIS6 628 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 RAB41Q5JT25 222 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 DGKKQ5KSL6 1271 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 EMC10Q5UCC4 262 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 SASS6Q6UVJ0 657 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 C11orf57Q6ZUT1 292 aaPredicted RBP13.43□□□□□ -0.26
GPC1-204ENST00000426280 USP34Q70CQ2 3546 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 PPM1KQ8N3J5 372 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 SPEM1Q8N4L4 309 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 CPA6Q8N4T0 437 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 ANKRD52Q8NB46 1076 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 FBXO44Q9H4M3 255 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 CYLDQ9NQC7 956 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.43□□□□□ -0.26
GPC1-204ENST00000426280 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
GPC1-204ENST00000426280 MYO15AQ9UKN7 3530 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
GPC1-204ENST00000426280 O00370 1275 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 PIK3R2O00459 728 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 HRO43593 1189 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 RNF40O75150 1001 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 AFPP02771 609 aaKnown RBP13.42□□□□□ -0.26
GPC1-204ENST00000426280 KLKB1P03952 638 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 CD19P15391 556 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 BRD2P25440 801 aaKnown RBP13.42□□□□□ -0.26
GPC1-204ENST00000426280 HSP90AA4PQ58FG1 418 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 LY6G5CQ5SRR4 150 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 HEATR6Q6AI08 1181 aaKnown RBP13.42□□□□□ -0.26
GPC1-204ENST00000426280 DPY19L2P1Q6NXN4 242 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 TMEM270Q6UE05 265 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 TMEM25Q86YD3 366 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 NAT16Q8N8M0 369 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 CD101Q93033 1021 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 ATP2A3Q93084 1043 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 CNOT6LQ96LI5 555 aaKnown RBP13.42□□□□□ -0.26
GPC1-204ENST00000426280 NT5C1BQ96P26 610 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 CRACR2AQ9BSW2 395 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 INTS2Q9H0H0 1204 aaKnown RBP13.42□□□□□ -0.26
GPC1-204ENST00000426280 ZDHHC4Q9NPG8 344 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 TLR8Q9NR97 1041 aaKnown RBP13.42□□□□□ -0.26
GPC1-204ENST00000426280 ZSCAN32Q9NX65 697 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 HCN2Q9UL51 889 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 PCDHB4Q9Y5E5 795 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.42□□□□□ -0.26
GPC1-204ENST00000426280 DMDP11532 3685 aa13.42□□□□□ -0.26
GPC1-204ENST00000426280 FANCMQ8IYD8 2048 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 E2F8A0AVK6 867 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 SYCE3A1L190 88 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 VDRP11473 427 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 HNRNPLP14866 589 aaKnown RBP eCLIP13.41□□□□□ -0.26
GPC1-204ENST00000426280 TUBP50607 506 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 PDE6CP51160 858 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 TKTL1P51854 596 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 ZNF132P52740 706 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 TYRO3Q06418 890 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 GRSF1Q12849 480 aaKnown RBP eCLIP13.41□□□□□ -0.26
GPC1-204ENST00000426280 LRRC32Q14392 662 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 SGO2Q562F6 1265 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 PMF1Q6P1K2 205 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 CCDC186Q7Z3E2 898 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 PHTF2Q8N3S3 785 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 ULBP1Q9BZM6 244 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 UBXN6Q9BZV1 441 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 NAGPAQ9UK23 515 aa13.41□□□□□ -0.26
GPC1-204ENST00000426280 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms