RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 TLR5O60602 858 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 TBX18O95935 607 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 SLC9A1P19634 815 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 TMEM196Q5HYL7 178 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 DGKKQ5KSL6 1271 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 TRIM65Q6PJ69 517 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 LCLAT1Q6UWP7 414 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 DDX42Q86XP3 938 aaKnown RBP eCLIP18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 CREBRFQ8IUR6 639 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 CPA6Q8N4T0 437 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 TTC16Q8NEE8 873 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 WBP2Q969T9 261 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 CRACR2AQ9BSW2 395 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 IER2Q9BTL4 223 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 RBM12Q9NTZ6 932 aaKnown RBP18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 FBXO4Q9UKT5 387 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 E2F8A0AVK6 867 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 GREM1O60565 184 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 SP9P0CG40 484 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 PLA2G4AP47712 749 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 PSEN1P49768 467 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 BCAT1P54687 386 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 BST2Q10589 180 aaKnown RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 CNGA2Q16280 664 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 MAN2A1Q16706 1144 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 TPD52L1Q16890 204 aaPredicted RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 GAB4Q2WGN9 574 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 PM20D1Q6GTS8 502 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 KLHDC10Q6PID8 442 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 GBP6Q6ZN66 633 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 RBBP8NLQ8NC74 664 aaPredicted RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 UBA3Q8TBC4 463 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 KLF16Q9BXK1 252 aaPredicted RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 FBRSL1Q9HCM7 1045 aaKnown RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 UBE2TQ9NPD8 197 aaPredicted RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 PRMT8Q9NR22 394 aaPredicted RBP18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 CLIC5Q9NZA1 410 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 MYO16Q9Y6X6 1858 aa18.85■□□□□ 0.61
IGHV3-47-201ENST00000425060 SLC9A3R1O14745 358 aaPredicted RBP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 LAMTOR5O43504 91 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 CALCAP01258 141 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 RARGP13631 454 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 ATP5C1P36542 298 aaKnown RBP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 MTIF2P46199 727 aaKnown RBP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 GALK1P51570 392 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 SLC8A3P57103 927 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 AMPD2Q01433 879 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 LRRC32Q14392 662 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 ZNF528Q3MIS6 628 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 MIIPQ5JXC2 388 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 NAIF1Q69YI7 327 aaPredicted RBP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 DPY19L2P1Q6NXN4 242 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 BHLHA9Q7RTU4 235 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 FAM114A1Q8IWE2 563 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 SYNPOQ8N3V7 929 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 ENOX1Q8TC92 643 aaKnown RBP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 SLC35F5Q8WV83 523 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 KCTD13Q8WZ19 329 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 NELL1Q92832 810 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 HESX1Q9UBX0 185 aa18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.84■□□□□ 0.61
IGHV3-47-201ENST00000425060 PIEZO1Q92508 2521 aa18.83■□□□□ 0.61
IGHV3-47-201ENST00000425060 SCAMP3O14828 347 aaKnown RBP18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 GABBR2O75899 941 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 NFATC1O95644 943 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 MBD3O95983 291 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 CYP17A1P05093 508 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 SETSIPP0DME0 302 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 BRD2P25440 801 aaKnown RBP18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 PON1P27169 355 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 TKTL1P51854 596 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 APBA1Q02410 837 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 NR1H3Q13133 447 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 STILQ15468 1287 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 EXOC3L4Q17RC7 722 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 GJB7Q6PEY0 223 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 RHBDF2Q6PJF5 856 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 ENOSF1Q7L5Y1 443 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 ALYREFQ86V81 257 aaKnown RBP18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 P2RY13Q9BPV8 354 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 TUBGCP2Q9BSJ2 902 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 NDST4Q9H3R1 872 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 SIX2Q9NPC8 291 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 TBC1D14Q9P2M4 693 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 NAGPAQ9UK23 515 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 NUDT5Q9UKK9 219 aa18.83■□□□□ 0.6
IGHV3-47-201ENST00000425060 ZBED1O96006 694 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 TDGF1P13385 188 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 MRE11P49959 708 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 DHCR24Q15392 516 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 VWA3BQ502W6 1294 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 HSP90AA4PQ58FG1 418 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 Q6ZS52 159 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 HTR3DQ70Z44 454 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 SCML4Q8N228 414 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 SPEM1Q8N4L4 309 aa18.82■□□□□ 0.6
IGHV3-47-201ENST00000425060 EZH1Q92800 747 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms