RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 F5H423 210 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 NDC80O14777 642 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 TM9SF1O15321 606 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 MTA2O94776 668 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 BAG6P46379 1132 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC5A3P53794 718 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 PKNOX1P55347 436 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 SNAPC2Q13487 334 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 DNAL1Q4LDG9 190 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 TTC13Q8NBP0 860 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 CAAP1Q9H8G2 361 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 DMAC2Q9NW81 257 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC24A2Q9UI40 661 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 H3BNX3 289 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 CSPG5O95196 566 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 THRAP10827 490 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 PAX3P23760 479 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 CA8P35219 290 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ETFBP38117 255 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 CENPCQ03188 943 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 MAP7D1Q3KQU3 841 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ATG14Q6ZNE5 492 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 NANOGNBQ7Z5D8 188 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 PATL1Q86TB9 770 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 RHOT1Q8IXI2 618 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 NUP93Q8N1F7 819 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 CPT1BQ92523 772 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 PAIP1Q9H074 479 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ZNF287Q9HBT7 754 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 HSPBP1Q9NZL4 362 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ZNF536O15090 1300 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 DCXO43602 365 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.532e-7■■□□□ 12.4
SEC61A1-202ENST00000424880 ACADVLP49748 655 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 SCARA3Q6AZY7 606 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 XKR5Q6UX68 686 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ADGRG6Q86SQ4 1221 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 OGFOD1Q8N543 542 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 ALLCQ8N6M5 410 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 FAM71DQ8N9W8 422 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 RTFDC1Q9BY42 306 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC17A6Q9P2U8 582 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 EBF1Q9UH73 591 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 CEPT1Q9Y6K0 416 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
SEC61A1-202ENST00000424880 SMCHD1A6NHR9 2005 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 HTR3EA5X5Y0 456 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 FBP2O00757 339 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 AIM2O14862 343 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 ADAM23O75077 832 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 MFAP3P55082 362 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 HDAC4P56524 1084 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 MRPS5P82675 430 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 SPIDRQ14159 915 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 TMEM214Q6NUQ4 689 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 RELL1Q8IUW5 271 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 ATP11CQ8NB49 1132 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 APOPT1Q96IL0 206 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 WWP1Q9H0M0 922 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 VAV3Q9UKW4 847 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 SSX2IPQ9Y2D8 614 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 TSC22D4Q9Y3Q8 395 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 NR2E3Q9Y5X4 410 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 STX16-NPEPL1H3BU86 382 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 J3QRK9 145 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC16A4O15374 487 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 GSTT2P0CG29 244 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 GSTT2BP0CG30 244 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 SOX10P56693 466 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 CLPPQ16740 277 aaPredicted RBP11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 ELMSAN1Q6PJG2 1045 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 C14orf80Q86SX3 495 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 DAW1Q8N136 415 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 HELQQ8TDG4 1101 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 SHC3Q92529 594 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 FBXL8Q96CD0 374 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 PGBD4Q96DM1 585 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 CCT7Q99832 543 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 ACSS3Q9H6R3 686 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 PNPOQ9NVS9 261 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 TRNAU1APQ9NX07 287 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 KIAA1522Q9P206 1035 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms