RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
PUDP-203ENST00000424830 PCDH15Q96QU1 1955 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 HOXC11O43248 304 aaPredicted RBP17.14■□□□□ 0.33
PUDP-203ENST00000424830 ZNF217O75362 1048 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 TULP3O75386 442 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 SYPP08247 313 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 FAM163BP0C2L3 166 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 CACNA2D1P54289 1103 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 ANO4Q32M45 955 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 HECTD3Q5T447 861 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 NAT16Q8N8M0 369 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 NACA2Q9H009 215 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 HSPBP1Q9NZL4 362 aa17.14■□□□□ 0.33
PUDP-203ENST00000424830 ATP8B3O60423 1300 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 VPS37CA5D8V6 355 aaPredicted RBP17.13■□□□□ 0.33
PUDP-203ENST00000424830 A8MXQ7 604 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 ARHGAP33O14559 1287 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 COCHO43405 550 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
PUDP-203ENST00000424830 DLATP10515 647 aaKnown RBP17.13■□□□□ 0.33
PUDP-203ENST00000424830 GABRG2P18507 467 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 TNNI1P19237 187 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 NTSR1P30989 418 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 SDE2Q6IQ49 451 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 CHCHD4Q8N4Q1 142 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 TERB1Q8NA31 727 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 B3GALNT2Q8NCR0 500 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 CLIC6Q96NY7 704 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 DPEP3Q9H4B8 488 aa17.13■□□□□ 0.33
PUDP-203ENST00000424830 FAM221BA6H8Z2 402 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 TUBP50607 506 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
PUDP-203ENST00000424830 SNRNP35Q16560 246 aaKnown RBP17.12■□□□□ 0.33
PUDP-203ENST00000424830 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 BBS7Q8IWZ6 715 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 ZFRQ96KR1 1074 aaKnown RBP17.12■□□□□ 0.33
PUDP-203ENST00000424830 HSPA12BQ96MM6 686 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 DUSP9Q99956 384 aaKnown RBP17.12■□□□□ 0.33
PUDP-203ENST00000424830 B3GNT5Q9BYG0 378 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 SPHK2Q9NRA0 654 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 TMEM30AQ9NV96 361 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 NME7Q9Y5B8 376 aa17.12■□□□□ 0.33
PUDP-203ENST00000424830 IGHV1OR15-9A0A0B4J2B8 117 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 A0A1W2PQD8 194 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 CLDN5O00501 218 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 CST3P01034 146 aaPredicted RBP17.11■□□□□ 0.33
PUDP-203ENST00000424830 WASP42768 502 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 FAM193AP78312 1265 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 SLC14A1Q13336 389 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 TRPC3Q13507 836 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 GRAMD4Q6IC98 578 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 RAB44Q7Z6P3 723 aaPredicted RBP17.11■□□□□ 0.33
PUDP-203ENST00000424830 PROSER1Q86XN7 944 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 CHPFQ8IZ52 775 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 CGRRF1Q99675 332 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
PUDP-203ENST00000424830 DNAAF2Q9NVR5 837 aaKnown RBP17.11■□□□□ 0.33
PUDP-203ENST00000424830 SUSD2Q9UGT4 822 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 CHORDC1Q9UHD1 332 aaPredicted RBP17.11■□□□□ 0.33
PUDP-203ENST00000424830 CYP8B1Q9UNU6 501 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 STARD13Q9Y3M8 1113 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 PCDHB9Q9Y5E1 797 aa17.11■□□□□ 0.33
PUDP-203ENST00000424830 A0A1W2PQF6 199 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 CLSTN1O94985 981 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 CD59P13987 128 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 PDCP20941 246 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
PUDP-203ENST00000424830 TRIP6Q15654 476 aaKnown RBP17.1■□□□□ 0.33
PUDP-203ENST00000424830 PLEKHG6Q3KR16 790 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 TMEM25Q86YD3 366 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 RDH13Q8NBN7 331 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 GLIS3Q8NEA6 775 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 OR2I1PQ8NGU4 316 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 CCDC127Q96BQ5 260 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
PUDP-203ENST00000424830 KCNK16Q96T55 309 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 MED10Q9BTT4 135 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 LRRC27Q9C0I9 530 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 CCSER2Q9H7U1 834 aa17.1■□□□□ 0.33
PUDP-203ENST00000424830 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
PUDP-203ENST00000424830 DNAJC17Q9NVM6 304 aaKnown RBP17.1■□□□□ 0.33
PUDP-203ENST00000424830 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
PUDP-203ENST00000424830 EIF3DO15371 548 aaKnown RBP eCLIP17.09■□□□□ 0.33
PUDP-203ENST00000424830 NDUFS2O75306 463 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
PUDP-203ENST00000424830 IRF1P10914 325 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 GNSP15586 552 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 NDUFV2P19404 249 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 SLC5A3P53794 718 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 PSMD6Q15008 389 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 SYCP2LQ5T4T6 812 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 EGFLAMQ63HQ2 1017 aa17.09■□□□□ 0.33
PUDP-203ENST00000424830 FAM35AQ86V20 835 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms