RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CSPG5O95196 566 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 PGM3O95394 542 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 AMHP03971 560 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 TK1P04183 234 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ANXA2P07355 339 aaKnown RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 TMIGD3P0DMS9 266 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 PCP11498 1178 aaKnown RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 MYL4P12829 197 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 LAMP2P13473 410 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 TFEBP19484 476 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CR2P20023 1033 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 COMTP21964 271 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 IL10P22301 178 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 TGM1P22735 817 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 TBXAS1P24557 533 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 AKT1P31749 480 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ADCY8P40145 1251 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 THPOP40225 353 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 WASP42768 502 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 AARSP49588 968 aaKnown RBP eCLIP4□□□□□ -1.77
SF3B1-205ENST00000424674 KCNQ1P51787 676 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF41P51814 821 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 TKTL1P51854 596 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 MANFP55145 182 aaKnown RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 KHDRBS1Q07666 443 aaKnown RBP eCLIP4□□□□□ -1.77
SF3B1-205ENST00000424674 NOLC1Q14978 699 aaKnown RBP eCLIP4□□□□□ -1.77
SF3B1-205ENST00000424674 STILQ15468 1287 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 RAB30Q15771 203 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ADIPOQQ15848 244 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 KYNUQ16719 465 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 SLC9C2Q5TAH2 1124 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 WDR73Q6P4I2 378 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CATSPERGQ6ZRH7 1159 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ESPNLQ6ZVH7 1005 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 MIGA2Q7L4E1 593 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CPLX4Q7Z7G2 160 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ZER1Q7Z7L7 766 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 TTC7BQ86TV6 843 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 DZIP1Q86YF9 867 aaKnown RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 FUKQ8N0W3 1084 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 PLBD2Q8NHP8 589 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CTCFLQ8NI51 663 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 WDR48Q8TAF3 677 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 GRK7Q8WTQ7 553 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 DEPDC1BQ8WUY9 529 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CUL5Q93034 780 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ATP6V0A1Q93050 837 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 EAF2Q96CJ1 260 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 VPS39Q96JC1 886 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CABS1Q96KC9 395 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 SORCS2Q96PQ0 1159 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 GSDMAQ96QA5 445 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 TWNKQ96RR1 684 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ADOQ96SZ5 270 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CITED2Q99967 270 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 BTBD2Q9BX70 525 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 NT5C3AQ9H0P0 336 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 C1orf21Q9H246 121 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 SUDS3Q9H7L9 328 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 ARMT1Q9H993 441 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 NOD2Q9HC29 1040 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 EXTL2Q9UBQ6 330 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 MAGEL2Q9UJ55 1249 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 LAMP5Q9UJQ1 280 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CDC42EP3Q9UKI2 254 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF215Q9UL58 517 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 EDARQ9UNE0 448 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 LIMCH1Q9UPQ0 1083 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 MAN2B2Q9Y2E5 1009 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 NR2E1Q9Y466 385 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 USP15Q9Y4E8 981 aaPredicted RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 CYP46A1Q9Y6A2 500 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 AP1M2Q9Y6Q5 423 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 KRT87PA6NCN2 255 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 AGAP14A8MT82 685 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 A8MVJ9 347 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 AKR1B15C9JRZ8 316 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 TAF4O00268 1085 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 CYR61O00622 381 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 DVL2O14641 736 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ASAP2O43150 1006 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SGTAO43765 313 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SYNCRIPO60506 623 aaKnown RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 CDC14BO60729 498 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SOCS5O75159 536 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 BBOX1O75936 387 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 RAD17O75943 681 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SNX4O95219 450 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 TNFRSF6BO95407 300 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 MPIG6BO95866 241 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SNRNP70P08621 437 aaKnown RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 EDNRBP24530 442 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 GRK5P34947 590 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ACVRL1P37023 503 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SUMO3P55854 103 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 MAP3K12Q12852 859 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 AIMP1Q12904 312 aaKnown RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 EIF2B5Q13144 721 aaKnown RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SLC14A1Q13336 389 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 MYBPC3Q14896 1274 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms