RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OLFML3Q9NRN5 406 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 DKK4Q9UBT3 224 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 APOBEC2Q9Y235 224 aaKnown RBP17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 NME7Q9Y5B8 376 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 ACACAQ13085 2346 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 KIAA0391O15091 583 aaKnown RBP17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 COCHO43405 550 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 TACC1O75410 805 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 GCNT3O95395 438 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 GNSP15586 552 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 YWHAQP27348 245 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 SURF1Q15526 300 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 DUOXA2Q1HG44 320 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 MDH1BQ5I0G3 518 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 SYCP2LQ5T4T6 812 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 HS2ST1Q7LGA3 356 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 SLCO6A1Q86UG4 719 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 TMEM25Q86YD3 366 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 RGL4Q8IZJ4 473 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 GPD1LQ8N335 351 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 HNRNPLLQ8WVV9 542 aaKnown RBP17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 FOXJ1Q92949 421 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 BBC3Q96PG8 261 aaPredicted RBP17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 MMS19Q96T76 1030 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 GABRG3Q99928 467 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 PCIF1Q9H4Z3 704 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 TBC1D7Q9P0N9 293 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 CYP8B1Q9UNU6 501 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 SH3BP1Q9Y3L3 701 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 PTPRJQ12913 1337 aa17.79■□□□□ 0.44
CHCHD3-202ENST00000423635 TRIM24O15164 1050 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 TNNC2P02585 160 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 WASP42768 502 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 CASP5P51878 434 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 ALCAMQ13740 583 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 WDR45BQ5MNZ6 344 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 HECTD3Q5T447 861 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 SDE2Q6IQ49 451 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 BBS7Q8IWZ6 715 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 SYCP3Q8IZU3 236 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 MDM1Q8TC05 714 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 DNASE2BQ8WZ79 361 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 ACOX2Q99424 681 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 IL37Q9NZH6 218 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 STK17AQ9UEE5 414 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 CHORDC1Q9UHD1 332 aaPredicted RBP17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 PCOLCE2Q9UKZ9 415 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 NFE2L3Q9Y4A8 694 aa17.78■□□□□ 0.44
CHCHD3-202ENST00000423635 H3BQV1 296 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 NDUFS2O75306 463 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 RTN3O95197 1032 aaPredicted RBP17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 TUBP50607 506 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 GRIK2Q13002 908 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 ANO4Q32M45 955 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 EGFLAMQ63HQ2 1017 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 DBX2Q6ZNG2 339 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 TMPRSS7Q7RTY8 843 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 METTL3Q86U44 580 aaKnown RBP17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 CHPFQ8IZ52 775 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 COL26A1Q96A83 441 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 EPSTI1Q96J88 318 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 ZNF518BQ9C0D4 1074 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 SNX25Q9H3E2 840 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 RAXQ9Y2V3 346 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 APC2O95996 2303 aa17.77■□□□□ 0.44
CHCHD3-202ENST00000423635 ZNF233A6NK53 670 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 GFRA2O00451 464 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 CST3P01034 146 aaPredicted RBP17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 ZDHHC11BP0C7U3 371 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 ZNF883P0CG24 379 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 MAOBP27338 520 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 GRAMD4Q6IC98 578 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 USP49Q70CQ1 688 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 OR6B3Q8NGW1 331 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 FBXO32Q969P5 355 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 WBP2Q969T9 261 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 MRGPRX1Q96LB2 322 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 B3GNT5Q9BYG0 378 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 CD93Q9NPY3 652 aa17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 SETXQ7Z333 2677 aaKnown RBP17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 URB1O60287 2271 aaKnown RBP17.76■□□□□ 0.43
CHCHD3-202ENST00000423635 A0A1B0GTW7 788 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 FAM92AA1XBS5 289 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 FRMD3A2A2Y4 597 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 PRRT4C9JH25 899 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 CACNG3O60359 315 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 DKK1O94907 266 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 CD6P30203 668 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 IFRD2Q12894 506 aaPredicted RBP17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 SF3A1Q15459 793 aaKnown RBP17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 HTR3DQ70Z44 454 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 SV2BQ7L1I2 683 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 WDR49Q8IV35 697 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 NOC3LQ8WTT2 800 aaKnown RBP17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 XPO6Q96QU8 1125 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms