RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 ZNF618Q5T7W0 954 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 RNF187Q5TA31 235 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 SLC9A4Q6AI14 798 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ZC3H18Q86VM9 953 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ANKMY2Q8IV38 441 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 PQLC3Q8N755 202 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 MGARPQ8TDB4 240 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 PYROXD1Q8WU10 500 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ZNF670Q9BS34 389 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 NSRP1Q9H0G5 558 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 GOLGA2P5Q9HBQ8 144 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 UBN1Q9NPG3 1134 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 GPATCH2LQ9NWQ4 482 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 SLC24A2Q9UI40 661 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 APOL1O14791 398 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 HUS1O60921 280 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 BANF1O75531 89 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 PHBP35232 272 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 LIG3P49916 1009 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 GPX6P59796 221 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 C1orf228Q6PIY5 440 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 ARHGEF18Q6ZSZ5 1173 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 TRABD2AQ86V40 505 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 PDIK1LQ8N165 341 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 ANKRD42Q8N9B4 389 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 ATP11CQ8NB49 1132 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 ARRDC4Q8NCT1 418 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 CCDC197Q8NCU1 140 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 SOCS4Q8WXH5 440 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 FAF2Q96CS3 445 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 TNIP3Q96KP6 325 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 HSFY1Q96LI6 401 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 FETUBQ9UGM5 382 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 XPO7Q9UIA9 1087 aaKnown RBP14.37□□□□□ -0.11
CDCA3-202ENST00000422785 CLUHO75153 1309 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 TCRBV7S3A2A0A539 114 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 POC1B-GALNT4F8VUJ3 575 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 H7C0C1 242 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 TMEM63AO94886 807 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 ATP5OP48047 213 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 LILRA4P59901 499 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 BASP1P80723 227 aaKnown RBP14.37□□□□□ -0.11
CDCA3-202ENST00000422785 CA9Q16790 459 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 TAF2Q6P1X5 1199 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 PPP1R21Q6ZMI0 780 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 PCDH19Q8TAB3 1148 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 SLC2A14Q8TDB8 520 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 CKAP2Q8WWK9 683 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 USP29Q9HBJ7 922 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
CDCA3-202ENST00000422785 CFAP69A5D8W1 941 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 TSHRP16473 764 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 WARSP23381 471 aaKnown RBP14.36□□□□□ -0.11
CDCA3-202ENST00000422785 LRPAP1P30533 357 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 BCAR1P56945 870 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 RNASELQ05823 741 aaKnown RBP14.36□□□□□ -0.11
CDCA3-202ENST00000422785 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
CDCA3-202ENST00000422785 CAPN12Q6ZSI9 719 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 ANKS4BQ8N8V4 417 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 CLEC4CQ8WTT0 213 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 RTP4Q96DX8 246 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 SENP1Q9P0U3 644 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 SAMD15Q9P1V8 674 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 RABGEF1Q9UJ41 708 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 CPP00450 1065 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 LCP1P13796 627 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 TFE3P19532 575 aaPredicted RBP14.36□□□□□ -0.11
CDCA3-202ENST00000422785 ITIH4Q14624 930 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 EFHC2Q5JST6 749 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 FAM228AQ86W67 206 aa14.36□□□□□ -0.11
CDCA3-202ENST00000422785 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 BCLAF3A2AJT9 711 aaKnown RBP14.35□□□□□ -0.11
CDCA3-202ENST00000422785 FAM47DPA6NHR8 397 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 FSBPO95073 299 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 AKR1A1P14550 325 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 NRLP54845 237 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 GEMIN4P57678 1058 aaKnown RBP14.35□□□□□ -0.11
CDCA3-202ENST00000422785 DPYSL2Q16555 572 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 TAX1BP1Q86VP1 789 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 TAB3Q8N5C8 712 aaPredicted RBP14.35□□□□□ -0.11
CDCA3-202ENST00000422785 B3GALNT2Q8NCR0 500 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 FBXO36Q8NEA4 188 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 SGSM3Q96HU1 749 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 WDR83Q9BRX9 315 aaKnown RBP14.35□□□□□ -0.11
CDCA3-202ENST00000422785 PAK5Q9P286 719 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 PSMC3IPQ9P2W1 217 aaPredicted RBP14.35□□□□□ -0.11
CDCA3-202ENST00000422785 TCP11X1B4DZS4 312 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 PTGESO14684 152 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 XPO1O14980 1071 aaKnown RBP14.35□□□□□ -0.11
CDCA3-202ENST00000422785 CHADO15335 359 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 KPNA6O60684 536 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 FAM163BP0C2L3 166 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 L1CAMP32004 1257 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 STX2P32856 288 aa14.35□□□□□ -0.11
CDCA3-202ENST00000422785 SLC18A1P54219 525 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms