RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 KLF8O95600 359 aaPredicted RBP18.3■□□□□ 0.52
PTCD1-202ENST00000419981 CAVIN2O95810 425 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 ZDHHC11BP0C7U3 371 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TRIM21P19474 475 aaKnown RBP18.3■□□□□ 0.52
PTCD1-202ENST00000419981 CMA1P23946 247 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 GAD2Q05329 585 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 MESP2Q0VG99 397 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TCEAL6Q6IPX3 200 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TMEM92Q6UXU6 159 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 SV2AQ7L0J3 742 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 UNC93AQ86WB7 457 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TTC30AQ86WT1 665 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 SFTPA1Q8IWL2 248 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 CRYBG2Q8N1P7 616 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 IL17RCQ8NAC3 791 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TXNDC5Q8NBS9 432 aaKnown RBP18.3■□□□□ 0.52
PTCD1-202ENST00000419981 ZMIZ2Q8NF64 920 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 SLC2A14Q8TDB8 520 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TCEAL3Q969E4 200 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 SPATA32Q96LK8 384 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 SMOQ99835 787 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 FBXO44Q9H4M3 255 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 HMGXB4Q9UGU5 601 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 HPSEQ9Y251 543 aa18.3■□□□□ 0.52
PTCD1-202ENST00000419981 TPRP12270 2363 aaKnown RBP18.3■□□□□ 0.52
PTCD1-202ENST00000419981 A0A0A0MRY4 1105 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 TM4SF5O14894 197 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 BEST1O76090 585 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 ASS1P00966 412 aaKnown RBP18.29■□□□□ 0.52
PTCD1-202ENST00000419981 HLA-DRAP01903 254 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 IRF1P10914 325 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 GRIA2P42262 883 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 ASPAP45381 313 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 MAP3K7CLP57077 242 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 EOGTQ5NDL2 527 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 BTBD8Q5XKL5 378 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 RNF43Q68DV7 783 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 SPOPLQ6IQ16 392 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
PTCD1-202ENST00000419981 DUSP9Q99956 384 aaKnown RBP18.29■□□□□ 0.52
PTCD1-202ENST00000419981 EDEM2Q9BV94 578 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 IMPG2Q9BZV3 1241 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 CSNK1G1Q9HCP0 422 aa18.29■□□□□ 0.52
PTCD1-202ENST00000419981 POLMQ9NP87 494 aaPredicted RBP18.29■□□□□ 0.52
PTCD1-202ENST00000419981 TLR8Q9NR97 1041 aaKnown RBP18.29■□□□□ 0.52
PTCD1-202ENST00000419981 CACNA1BQ00975 2339 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 SGK1O00141 431 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 MAPK13O15264 365 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 TLR5O60602 858 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 FAM200BP0CF97 657 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
PTCD1-202ENST00000419981 HNRNPLP14866 589 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTCD1-202ENST00000419981 BCKDHBP21953 392 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 ADORA2BP29275 332 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 SYKP43405 635 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 TNFRSF4P43489 277 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 KIR2DL1P43626 348 aaPredicted RBP18.28■□□□□ 0.52
PTCD1-202ENST00000419981 VAMP7P51809 220 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 KRT85P78386 507 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 PREPLQ4J6C6 727 aaPredicted RBP18.28■□□□□ 0.52
PTCD1-202ENST00000419981 CYP2U1Q7Z449 544 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 BBS7Q8IWZ6 715 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 PHTF2Q8N3S3 785 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 NAT16Q8N8M0 369 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 C12orf29Q8N999 325 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 WHAMMQ8TF30 809 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 SPHK2Q9NRA0 654 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 TRAF3IP3Q9Y228 551 aa18.28■□□□□ 0.52
PTCD1-202ENST00000419981 ASCC3Q8N3C0 2202 aaKnown RBP18.27■□□□□ 0.52
PTCD1-202ENST00000419981 HOXC11O43248 304 aaPredicted RBP18.27■□□□□ 0.52
PTCD1-202ENST00000419981 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 NR2F2P24468 414 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 ANO4Q32M45 955 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 C1orf220Q5T0J3 134 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 EMC10Q5UCC4 262 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 ETFBKMTQ8IXQ9 262 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 OLIG1Q8TAK6 271 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 SPACA7Q96KW9 195 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
PTCD1-202ENST00000419981 ZDHHC4Q9NPG8 344 aa18.27■□□□□ 0.52
PTCD1-202ENST00000419981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTCD1-202ENST00000419981 BCCIPQ9P287 314 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTCD1-202ENST00000419981 MAP1BP46821 2468 aaKnown RBP18.27■□□□□ 0.51
PTCD1-202ENST00000419981 GON4LQ3T8J9 2241 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 ACACBO00763 2458 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 TBC1D3BA6NDS4 549 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 TULP3O75386 442 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 RHOBTB3O94955 611 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 TRIM49P0CI25 452 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 TRIM49CP0CI26 452 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 DHPSP49366 369 aaPredicted RBP18.26■□□□□ 0.51
PTCD1-202ENST00000419981 PGFP49763 221 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 INCA1Q0VD86 236 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 NFIL3Q16649 462 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 CLEC20AQ6ZU45 233 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 NUDT18Q6ZVK8 323 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 INTS8Q75QN2 995 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms