RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CYP3A43Q9HB55 503 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 AMACRQ9UHK6 382 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 NENFQ9UMX5 172 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 THAP12O43422 761 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 LUC7L3O95232 432 aaKnown RBP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 ANP32DO95626 131 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 CA3P07451 260 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 FERP16591 822 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 DHX34Q14147 1143 aaKnown RBP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 RTP2Q5QGT7 225 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 LIMS2Q7Z4I7 341 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 TOP6BLQ8N6T0 577 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 COLGALT1Q8NBJ5 622 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 OLIG1Q8TAK6 271 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 HES6Q96HZ4 224 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 FAM81BQ96LP2 452 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 HEXIM2Q96MH2 286 aaKnown RBP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 RTP3Q9BQQ7 232 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM175Q9BSA9 504 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 NT5C1AQ9BXI3 368 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 AP1M1Q9BXS5 423 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 GABRDO14764 452 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 TTI1O43156 1089 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 RPSAP08865 295 aaKnown RBP13.48□□□□□ -0.25
LINC00642-201ENST00000419459 OR4Q2P0C623 313 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 YWHAHQ04917 246 aaPredicted RBP13.48□□□□□ -0.25
LINC00642-201ENST00000419459 DENND2CQ68D51 928 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 OVOS1Q6IE37 1185 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
LINC00642-201ENST00000419459 OR10T2Q8NGX3 314 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 DDX1Q92499 740 aaKnown RBP13.48□□□□□ -0.25
LINC00642-201ENST00000419459 STAMBPL1Q96FJ0 436 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 COLEC11Q9BWP8 271 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 INTS9Q9NV88 658 aaKnown RBP13.48□□□□□ -0.25
LINC00642-201ENST00000419459 COL6A3P12111 3177 aa13.48□□□□□ -0.25
LINC00642-201ENST00000419459 H2AFZP0C0S5 128 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 CCDC130P13994 396 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 NQO1P15559 274 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 DNAJB2P25686 324 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 CCNG1P51959 295 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 PMS2P54278 862 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ACCSLQ4AC99 568 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 H2AFVQ71UI9 128 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 BZW1Q7L1Q6 419 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 TAOK1Q7L7X3 1001 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 NT5DC3Q86UY8 548 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 LNX1Q8TBB1 728 aaPredicted RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 AUTS2Q8WXX7 1259 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 TBC1D31Q96DN5 1066 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 C17orf80Q9BSJ5 609 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 CERS4Q9HA82 394 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 SPATS2LQ9NUQ6 558 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 O00370 1275 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 CHRNB2P17787 502 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 LAG3P18627 525 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 YWHAEP62258 255 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 FMO1Q01740 532 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 B3GALNT2Q8NCR0 500 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 CLP1Q92989 425 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ERP44Q9BS26 406 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ADAM7Q9H2U9 754 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ALG13Q9NP73 1137 aaKnown RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 TAS2R14Q9NYV8 317 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 RASAL2Q9UJF2 1139 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 GTF3C4Q9UKN8 822 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 CORO1CQ9ULV4 474 aaPredicted RBP13.47□□□□□ -0.25
LINC00642-201ENST00000419459 ATP8A1Q9Y2Q0 1164 aa13.47□□□□□ -0.25
LINC00642-201ENST00000419459 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 CLDN5O00501 218 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 DDX3XO00571 662 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 RGS16O15492 202 aaPredicted RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 FGF18O76093 207 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 OAS1P00973 400 aaKnown RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 CYP11A1P05108 521 aa13.46□□□□□ -0.25
LINC00642-201ENST00000419459 RPL17P18621 184 aaKnown RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 WARSP23381 471 aaKnown RBP13.46□□□□□ -0.25
LINC00642-201ENST00000419459 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms