RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 CLPTM1LQ96KA5 538 aa6.33□□□□□ -1.4
VPS45-203ENST00000419023 PORCNQ9H237 461 aa6.33□□□□□ -1.4
VPS45-203ENST00000419023 TXNRD2Q9NNW7 524 aa6.33□□□□□ -1.4
VPS45-203ENST00000419023 DDX4Q9NQI0 724 aaKnown RBP6.33□□□□□ -1.4
VPS45-203ENST00000419023 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
VPS45-203ENST00000419023 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.33□□□□□ -1.4
VPS45-203ENST00000419023 DOCK3Q8IZD9 2030 aa6.33□□□□□ -1.4
VPS45-203ENST00000419023 COL2A1P02458 1487 aaPredicted RBP6.33□□□□□ -1.4
VPS45-203ENST00000419023 TTC28Q96AY4 2481 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 GPR75-ASB3A0A0A6YYF3 556 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 GRXCR1A8MXD5 290 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 MATN3O15232 486 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 SEPT4O43236 478 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 SGTAO43765 313 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 STRNO43815 780 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 CIAO1O76071 339 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 POU2F2P09086 479 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 CLTBP09497 229 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 RARBP10826 455 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 VCAM1P19320 739 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 MGAT1P26572 445 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 IL15P40933 162 aaPredicted RBP6.32□□□□□ -1.4
VPS45-203ENST00000419023 PHKA1P46020 1223 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 CTXN1P60606 82 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 DSC2Q02487 901 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 NHLH2Q02577 135 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 CREMQ03060 361 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 TLE2Q04725 743 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 FOXE3Q13461 319 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 MVPQ14764 893 aaKnown RBP6.32□□□□□ -1.4
VPS45-203ENST00000419023 RAB30Q15771 203 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 RABL3Q5HYI8 236 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 SEM1Q6ZVN7 128 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 USP45Q70EL2 814 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 DCBLD1Q8N8Z6 715 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 IFI44Q8TCB0 444 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 CPT1CQ8TCG5 803 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 JPH3Q8WXH2 748 aaPredicted RBP6.32□□□□□ -1.4
VPS45-203ENST00000419023 SIL1Q9H173 461 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 ZNF703Q9H7S9 590 aaPredicted RBP6.32□□□□□ -1.4
VPS45-203ENST00000419023 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 CFAP20Q9Y6A4 193 aaKnown RBP6.32□□□□□ -1.4
VPS45-203ENST00000419023 MUC3AQ02505 3323 aa6.32□□□□□ -1.4
VPS45-203ENST00000419023 A0A1B0GUL6 1792 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 DOCK1Q14185 1865 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 TRIM43BA6NCK2 446 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 DRGXA6NNA5 263 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 KIAA0391O15091 583 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 PQBP1O60828 265 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 SCAF4O95104 1147 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 POMCP01189 267 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 RPLP2P05387 115 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 HOXC6P09630 235 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 CHN2P52757 468 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 SLC25A3Q00325 362 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 MECOMQ03112 1051 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 PPIGQ13427 754 aaKnown RBP eCLIP6.31□□□□□ -1.43e-6■■□□□ 11.6
VPS45-203ENST00000419023 LRRC41Q15345 812 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 TMEM31Q5JXX7 168 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 MED25Q71SY5 747 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 TTC7BQ86TV6 843 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 ANKRD44Q8N8A2 993 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 SLC44A5Q8NCS7 719 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 NUP133Q8WUM0 1156 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 TRIM43Q96BQ3 446 aaPredicted RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 ZNF503Q96F45 646 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 KAZALD1Q96I82 304 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 MRGPRX4Q96LA9 322 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 NEUROD6Q96NK8 337 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 DMRTA2Q96SC8 542 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 NUP88Q99567 741 aaPredicted RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 GTPBP4Q9BZE4 634 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 C11orf54Q9H0W9 315 aaPredicted RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 CDH19Q9H159 772 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 VPS11Q9H270 941 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 PRKRIP1Q9H875 184 aaPredicted RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 SLC28A3Q9HAS3 691 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 FBXO34Q9NWN3 711 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 TRPM5Q9NZQ8 1165 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 NOB1Q9ULX3 412 aaKnown RBP6.31□□□□□ -1.4
VPS45-203ENST00000419023 DOCK2Q92608 1830 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 CACNA1FO60840 1977 aa6.31□□□□□ -1.4
VPS45-203ENST00000419023 LAMA2P24043 3122 aaKnown RBP6.3□□□□□ -1.4
VPS45-203ENST00000419023 PDS5AQ29RF7 1337 aaKnown RBP6.3□□□□□ -1.4
VPS45-203ENST00000419023 KIAA0355O15063 1070 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 DTNBO60941 627 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 RECQL4O94761 1208 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 UBTFL1P0CB47 393 aaPredicted RBP6.3□□□□□ -1.4
VPS45-203ENST00000419023 CYBAP13498 195 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 TNFRSF1AP19438 455 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 AKAP5P24588 427 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 RNASE9P60153 205 aaKnown RBP6.3□□□□□ -1.4
VPS45-203ENST00000419023 GRB14Q14449 540 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 PLS1Q14651 629 aa6.3□□□□□ -1.4
VPS45-203ENST00000419023 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms