RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ITGALP20701 1170 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NOL9Q5SY16 702 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NT5DC3Q86UY8 548 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 TMCC3Q9ULS5 477 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 TK2O00142 265 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NKRFO15226 690 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SKAP2O75563 359 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 ALBP02768 609 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NME5P56597 212 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 VSNL1P62760 191 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 C1QTNF7Q9BXJ2 289 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 DDX43Q9NXZ2 648 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SNTG2Q9NY99 539 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 H3BRB1 525 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 TSPAN3O60637 253 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NDUFS2O75306 463 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CSDE1O75534 798 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 BMP10O95393 424 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 MAPK1P28482 360 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 LAMTOR4Q0VGL1 99 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CYP4Z1Q86W10 505 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 E2F7Q96AV8 911 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 TUT1Q9H6E5 874 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CYP4F12Q9HCS2 524 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 RPRD1BQ9NQG5 326 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NUDT14O95848 222 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 VDRP11473 427 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 PSMA4P25789 261 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SERPINB8P50452 374 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 KCNT1Q5JUK3 1230 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 FAM172AQ8WUF8 416 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 CASP10Q92851 521 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 ZDHHC15Q96MV8 337 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 FOXP3Q9BZS1 431 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 DCDC2Q9UHG0 476 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 RAB23Q9ULC3 237 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 A0A1B0GTH6 734 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SMAPO00193 183 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SLC37A4O43826 429 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 XYLBO75191 536 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 GLP2RO95838 553 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SERPINB5P36952 375 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 GLRBP48167 497 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 NBPF12Q5TAG4 269 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 RIBC1Q8N443 379 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 MAP3K14Q99558 947 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 MKNK1Q9BUB5 465 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 BBS2Q9BXC9 721 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 SPATC1LQ9H0A9 340 aa11.57□□□□□ -0.56
PTCH1-205ENST00000418258 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 IARS2Q9NSE4 1012 aaKnown RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 USP15Q9Y4E8 981 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-205ENST00000418258 BCORL1Q5H9F3 1711 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 TECPR2O15040 1411 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 OR1E1P30953 314 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 HALP42357 657 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 NUDT2P50583 147 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 RINLQ6ZS11 566 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 SETD3Q86TU7 594 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 WDR24Q96S15 920 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 EPN3Q9H201 632 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 ARMC7Q9H6L4 198 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 ZNF521Q96K83 1311 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 POP1Q99575 1024 aaKnown RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 POLLQ9UGP5 575 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 KIAA1257Q9ULG3 409 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 LZTS1Q9Y250 596 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 NFIBO00712 420 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 ITGB6P18564 788 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 CYP11B2P19099 503 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 HNRNPH2P55795 449 aaKnown RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 PDK2Q15119 407 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 GRIK4Q16099 956 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 TFAP2DQ7Z6R9 452 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 MRPL48Q96GC5 212 aaKnown RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 SDR42E2A6NKP2 422 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 SNTNA6NMZ2 147 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 AKAP5P24588 427 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 SLC26A2P50443 739 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 OVOS1Q6IE37 1185 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 FDXACB1Q9BRP7 624 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 RNF208Q9H0X6 261 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 XPNPEP3Q9NQH7 507 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 PPP2R3BQ9Y5P8 575 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 E9PBE3 544 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 CTSEP14091 401 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 NR1I3Q14994 352 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 NFE2Q16621 373 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 PRR23CQ6ZRP0 262 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 KRT77Q7Z794 578 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 JAMLQ86YT9 394 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 A0A1B0GW55 424 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms