RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SEPT8Q92599 483 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 ZNF670Q9BS34 389 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 CALN1Q9BXU9 219 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 PRDM16Q9HAZ2 1276 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 STAP1Q9ULZ2 295 aa17.54■□□□□ 0.4
SSBP3-205ENST00000417664 TRAPPC3O43617 180 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 BEST1O76090 585 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 KRT14P02533 472 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 RARGP13631 454 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 BRCC3P46736 316 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 HTRA3P83110 453 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 TSPY1Q01534 308 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 DPYSL3Q14195 570 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 KRT81Q14533 505 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 SCYL2Q6P3W7 929 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 SCML4Q8N228 414 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 CLEC4CQ8WTT0 213 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 NT5C3BQ969T7 300 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 RNF157Q96PX1 679 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 RTP3Q9BQQ7 232 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 PABPC3Q9H361 631 aaKnown RBP17.53■□□□□ 0.4
SSBP3-205ENST00000417664 RRN3Q9NYV6 651 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 PLAAQ9Y263 795 aa17.53■□□□□ 0.4
SSBP3-205ENST00000417664 POLR3GO15318 223 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 HOXA2O43364 376 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 NBNO60934 754 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 CD48P09326 243 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 IBSPP21815 317 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 TKTL1P51854 596 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 PMS2P54278 862 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 OTUD4Q01804 1114 aaKnown RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 UAP1Q16222 522 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 DPYSL2Q16555 572 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 RHBDF2Q6PJF5 856 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 COLGALT2Q8IYK4 626 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 ACTL9Q8TC94 416 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 UBLCP1Q8WVY7 318 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 FAM149B1Q96BN6 582 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 DEFB118Q96PH6 123 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 SLC2A13Q96QE2 648 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 PKMYT1Q99640 499 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 SMOQ99835 787 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 SNRNP25Q9BV90 132 aaKnown RBP17.52■□□□□ 0.4
SSBP3-205ENST00000417664 POPDC2Q9HBU9 364 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 PCDH9Q9HC56 1237 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 ATP8A1Q9Y2Q0 1164 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 TSC2P49815 1807 aa17.52■□□□□ 0.4
SSBP3-205ENST00000417664 GOLGA6L10A6NI86 522 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 ENPP3O14638 875 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 RDXP35241 583 aaKnown RBP17.52■□□□□ 0.39
SSBP3-205ENST00000417664 YWHAHQ04917 246 aaPredicted RBP17.52■□□□□ 0.39
SSBP3-205ENST00000417664 RNASELQ05823 741 aaKnown RBP17.52■□□□□ 0.39
SSBP3-205ENST00000417664 BNIPLQ7Z465 357 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 CROCCP2Q86T23 111 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 ABI1Q8IZP0 508 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 DEFB106AQ8N104 65 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.52■□□□□ 0.39
SSBP3-205ENST00000417664 IRGQQ8WZA9 623 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 MYLPFQ96A32 169 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 FAF2Q96CS3 445 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 TRIM62Q9BVG3 475 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 PCDH18Q9HCL0 1135 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 TBC1D13Q9NVG8 400 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 VPS18Q9P253 973 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 ANAPC5Q9UJX4 755 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 FAN1Q9Y2M0 1017 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 PCDHB7Q9Y5E2 793 aa17.52■□□□□ 0.39
SSBP3-205ENST00000417664 H0YGN5 161 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 MCF2LO15068 1137 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 DDHD2O94830 711 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 NUDT17P0C025 328 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 CCL5P13501 91 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 ZFXP17010 805 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-205ENST00000417664 TGM2P21980 687 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 STIP1P31948 543 aaKnown RBP17.51■□□□□ 0.39
SSBP3-205ENST00000417664 AIF1P55008 147 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 DAOAP59103 153 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 CCDC142Q17RM4 750 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 PAN2Q504Q3 1202 aaKnown RBP17.51■□□□□ 0.39
SSBP3-205ENST00000417664 C4orf50Q6ZRC1 276 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 TRMT10CQ7L0Y3 403 aaKnown RBP17.51■□□□□ 0.39
SSBP3-205ENST00000417664 ANKRD33Q7Z3H0 272 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 ZMIZ2Q8NF64 920 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 DBF4BQ8NFT6 615 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 RNF208Q9H0X6 261 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-205ENST00000417664 RCOR3Q9P2K3 495 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-205ENST00000417664 NFS1Q9Y697 457 aa17.51■□□□□ 0.39
SSBP3-205ENST00000417664 I3L4J1 428 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 SYN3O14994 580 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 TP73O15350 636 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 OAZ2O95190 189 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 ITGA8P53708 1063 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 DYNLT1P63172 113 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 GPNMBQ14956 572 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 DCAF6Q58WW2 860 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 PCGF5Q86SE9 256 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 ZNF280BQ86YH2 543 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms