RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HSPBP1Q9NZL4 362 aa15.28■□□□□ 0.04
NCKIPSD-204ENST00000416649 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
NCKIPSD-204ENST00000416649 PRR12Q9ULL5 1215 aa15.28■□□□□ 0.04
NCKIPSD-204ENST00000416649 CYP3A7-CYP3A51PA0A087WV96 503 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 TCRBV7S3A2A0A539 114 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 BTBD19C9JJ37 291 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 TLR3O15455 904 aaKnown RBP15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 FOXD2O60548 495 aaPredicted RBP15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 TNFAIP8O95379 198 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 CRTAMO95727 393 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 DHRS4L1P0CG22 281 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 ZNF24P17028 368 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 CYP3A7P24462 503 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 COPAP53621 1224 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 PDE1CQ14123 709 aaPredicted RBP15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 CES4AQ5XG92 561 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 ATG16L1Q676U5 607 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 TRIML2Q8N7C3 387 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 TTC13Q8NBP0 860 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 TAS1R2Q8TE23 839 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 MRPS26Q9BYN8 205 aaKnown RBP15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 C20orf27Q9GZN8 174 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 RBM38Q9H0Z9 239 aaKnown RBP15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 CDH22Q9UJ99 828 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.04
NCKIPSD-204ENST00000416649 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 PEX1O43933 1283 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 GRIN3BO60391 1043 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 MSX2P35548 267 aaPredicted RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 GJA8P48165 433 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 ENTPD1P49961 510 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 OXCT1P55809 520 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 FKBP1AP62942 108 aaKnown RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 MYBPC1Q00872 1141 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 BMPR2Q13873 1038 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 BTG3Q14201 252 aaPredicted RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 OASLQ15646 514 aaKnown RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 NFIL3Q16649 462 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 CBWD2Q8IUF1 395 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 MICALL2Q8IY33 904 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 EXD1Q8NHP7 514 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 DDX1Q92499 740 aaKnown RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 PPP1R14BQ96C90 147 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 ERLEC1Q96DZ1 483 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 FAM20AQ96MK3 541 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 MMP19Q99542 508 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 CORO1BQ9BR76 489 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 FOCADQ5VW36 1801 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 PSTPIP1O43586 416 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 TBC1D12O60347 775 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 NCF2P19878 526 aaPredicted RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 HDAC4P56524 1084 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 SNAPC2Q13487 334 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 ZNF410Q86VK4 478 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 PDIK1LQ8N165 341 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 POMGNT1Q8WZA1 660 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 CFAP36Q96G28 342 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 LRGUKQ96M69 825 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 BTBD9Q96Q07 612 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 WDR83Q9BRX9 315 aaKnown RBP15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 ZNF341Q9BYN7 854 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 FAIMQ9NVQ4 179 aa15.27■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC26A4O43511 780 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 XPOTO43592 962 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 ADRB2P07550 413 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 PRELPP51888 382 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 NRLP54845 237 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 GDF10P55107 478 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 XIAPP98170 497 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 FAM91A1Q658Y4 838 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 KATNAL2Q8IYT4 538 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 TMIGD2Q96BF3 282 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 TRIM56Q9BRZ2 755 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 AMNQ9BXJ7 453 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 ANLNQ9NQW6 1124 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 E2F6O75461 281 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 SERPINA6P08185 405 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 PIM1P11309 404 aaPredicted RBP15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 CDH2P19022 906 aaPredicted RBP15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 DCUN1D5Q9BTE7 237 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 XPNPEP1Q9NQW7 623 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 RRN3Q9NYV6 651 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 XPO7Q9UIA9 1087 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 POLIQ9UNA4 740 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 HEY1Q9Y5J3 304 aa15.26■□□□□ 0.03
NCKIPSD-204ENST00000416649 IPO5O00410 1097 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 ADCY6O43306 1168 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 LYPLA1O75608 230 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 TOP3BO95985 862 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 CFHP08603 1231 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 ELK3P41970 407 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 STAT2P52630 851 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 ANKDD1AQ495B1 522 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 MFSD4BQ5TF39 518 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 IGDCC3Q8IVU1 814 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 MARVELD2Q8N4S9 558 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms