RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 CWF19L1Q69YN2 538 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 ASTLQ6HA08 431 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 DPY19L2P1Q6NXN4 242 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 TPRG1Q6ZUI0 275 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 TADA2BQ86TJ2 420 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 ALYREFQ86V81 257 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 SIX6OS1Q8N1H7 587 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 TTC16Q8NEE8 873 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 SLC35F5Q8WV83 523 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 SECISBP2LQ93073 1101 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 ZFYVE19Q96K21 471 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 CDK5RAP1Q96SZ6 601 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 CCSER2Q9H7U1 834 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 GKN1Q9NS71 199 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 CLIC5Q9NZA1 410 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 NAGPAQ9UK23 515 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 AJAP1Q9UKB5 411 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 DAAM1Q9Y4D1 1078 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 CPQQ9Y646 472 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 MYH10P35580 1976 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 CACNA1HO95180 2353 aa18.95■□□□□ 0.62
SEMA3B-201ENST00000416295 ANAPC1Q9H1A4 1944 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 A0A1W2PQH9 124 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 LEFTY2O00292 366 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 ZBED1O96006 694 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 CALCAP01258 141 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 RALAP11233 206 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 MRE11P49959 708 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 PTK2Q05397 1052 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 ADIGQ0VDE8 80 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 KLHDC10Q6PID8 442 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 ZNF276Q8N554 614 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 RIN3Q8TB24 985 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 ZNF606Q8WXB4 792 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 FAM83CQ9BQN1 747 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 DDX23Q9BUQ8 820 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 C8orf33Q9H7E9 229 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 SMPD4Q9NXE4 827 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 MRPS17Q9Y2R5 130 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 FHOD1Q9Y613 1164 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 PIAS3Q9Y6X2 628 aa18.94■□□□□ 0.62
SEMA3B-201ENST00000416295 KANSL1LA0AUZ9 987 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 FOXN3O00409 490 aaPredicted RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 MAN2B1O00754 1011 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 ATP1A3P13637 1013 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 AOC1P19801 751 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 ATP5C1P36542 298 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 IFNAR2P48551 515 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 PGFP49763 221 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 KPNA1P52294 538 aaPredicted RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 BPIFB4P59827 614 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 TPM4P67936 248 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 UBXN1Q04323 297 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 TCF15Q12870 199 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 DRAP1Q14919 205 aaPredicted RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 ITPRIPL2Q3MIP1 535 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 PM20D1Q6GTS8 502 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 ZNF852Q6ZMS4 543 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 APTXQ7Z2E3 356 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 FAM71AQ8IYT1 594 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 SCML4Q8N228 414 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 OSCP1Q8WVF1 389 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 HSFY1Q96LI6 401 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 NELL2Q99435 816 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 ULBP1Q9BZM6 244 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 NMUR1Q9HB89 426 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 CNGB3Q9NQW8 809 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 OSER1Q9NX31 292 aa18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 DUS2Q9NX74 493 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-201ENST00000416295 SLC9A3R1O14745 358 aaPredicted RBP18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 RARGP13631 454 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 ZXDBP98169 803 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 TNK2Q07912 1038 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 GOLGA8FQ08AF8 430 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 GOLGA8DPQ0D2H9 430 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 IQCB1Q15051 598 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 SYCP1Q15431 976 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 PMF1Q6P1K2 205 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 SCD5Q86SK9 330 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 ATP2A3Q93084 1043 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 PCMTD1Q96MG8 357 aaPredicted RBP18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 ERGIC2Q96RQ1 377 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 STK33Q9BYT3 514 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 ACP6Q9NPH0 428 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 FAM207AQ9NSI2 230 aaPredicted RBP18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 GTSE1Q9NYZ3 720 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 CFAP97Q9P2B7 532 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 DNMT3LQ9UJW3 386 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 SIK3Q9Y2K2 1263 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 SIT1Q9Y3P8 196 aa18.92■□□□□ 0.62
SEMA3B-201ENST00000416295 MYO16Q9Y6X6 1858 aa18.91■□□□□ 0.62
SEMA3B-201ENST00000416295 GALR2O43603 387 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-201ENST00000416295 GPD2P43304 727 aa18.91■□□□□ 0.62
SEMA3B-201ENST00000416295 RGS7P49802 495 aa18.91■□□□□ 0.62
SEMA3B-201ENST00000416295 YWHAGP61981 247 aaKnown RBP eCLIP18.91■□□□□ 0.62
SEMA3B-201ENST00000416295 RUNX3Q13761 415 aa18.91■□□□□ 0.62
SEMA3B-201ENST00000416295 FILIP1LQ4L180 1135 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms