RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ZNF384Q8TF68 577 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 SLC17A7Q9P2U7 560 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
SCN1B-202ENST00000415950 NEURL4Q96JN8 1562 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 EXTL3O43909 919 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 USP12O75317 370 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 TXNP10599 105 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 EFNA5P52803 228 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 CSE1LP55060 971 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 TAS2R40P59535 323 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 FMO1Q01740 532 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PPHLN1Q8NEY8 458 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 TNIP3Q96KP6 325 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 TRIM54Q9BYV2 358 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 ACSS2Q9NR19 701 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 SLC8A2Q9UPR5 921 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PKNOX1P55347 436 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 ABCE1P61221 599 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 SLC1A5Q15758 541 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 UGP2Q16851 508 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 TRIM16LQ309B1 348 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 LRRC8BQ6P9F7 803 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 CRELD2Q6UXH1 353 aaPredicted RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 SLC26A11Q86WA9 606 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 CYP4X1Q8N118 509 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PCYOX1Q9UHG3 505 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 NELFEP18615 380 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PTGER2P43116 358 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 HHIPL2Q6UWX4 724 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 BNIPLQ7Z465 357 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 ALYREFQ86V81 257 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 C11orf74Q86VG3 221 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 ABRAQ8N0Z2 381 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 DTNBP1Q96EV8 351 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 ZNF184Q99676 751 aaPredicted RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 BBS2Q9BXC9 721 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PIF1Q9H611 641 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 NDUFS3O75489 264 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 SUPT7LO94864 414 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 PSMG1O95456 288 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 CPB1P15086 417 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 RHBDL3P58872 404 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 OASLQ15646 514 aaKnown RBP13.32□□□□□ -0.28
SCN1B-202ENST00000415950 EFHC1Q5JVL4 640 aa13.32□□□□□ -0.28
SCN1B-202ENST00000415950 MYO1DO94832 1006 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 FECHP22830 423 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 RBP5P82980 135 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 NPNTQ6UXI9 565 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 TMPRSS6Q8IU80 811 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ART4Q93070 314 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 GGA2Q9UJY4 613 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ZNF197O14709 1029 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 DDX3YO15523 660 aaKnown RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 TMCC1O94876 653 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ALBP02768 609 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 GSTT1P30711 240 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 SERPINB1P30740 379 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 DENND1BQ6P3S1 775 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 PTAR1Q7Z6K3 402 aaPredicted RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 SLC7A14Q8TBB6 771 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ARL8BQ9NVJ2 186 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 DLG5Q8TDM6 1919 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 EEF2KO00418 725 aaKnown RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 SERPIND1P05546 499 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ETFBP38117 255 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 FSTL1Q12841 308 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 WASHC2DQ5SRD0 308 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 KCNMB3Q9NPA1 279 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 TAGLN3Q9UI15 199 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 FAM32AQ9Y421 112 aaKnown RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 DCCP43146 1447 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 SUPT3HB4E1H0 165 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 KRT75O95678 551 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 AP3M2P53677 418 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 CCDC60Q8IWA6 550 aaPredicted RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 EIF1ADQ8N9N8 165 aaKnown RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ASAP3Q8TDY4 903 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 RXFP2Q8WXD0 754 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 ILKAPQ9H0C8 392 aaPredicted RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 DENND2DQ9H6A0 471 aaPredicted RBP13.31□□□□□ -0.28
SCN1B-202ENST00000415950 SLC24A2Q9UI40 661 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 AK5Q9Y6K8 562 aa13.31□□□□□ -0.28
SCN1B-202ENST00000415950 RGS5O15539 181 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 CTSHP09668 335 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 TBL3Q12788 808 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms