RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PYGMP11217 842 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ATF2P15336 505 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 GJA8P48165 433 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ELF3P78545 371 aaPredicted RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 DSC1Q08554 894 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 NR1H3Q13133 447 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 PTK6Q13882 451 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 PIGHQ14442 188 aaPredicted RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 GPNMBQ14956 572 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 NOMO2Q5JPE7 1267 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 HIBCHQ6NVY1 386 aaPredicted RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 TTC27Q6P3X3 843 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 DCUN1D2Q6PH85 259 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 DCLRE1AQ6PJP8 1040 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 DSTYKQ6XUX3 929 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 PPP1R21Q6ZMI0 780 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ZDHHC17Q8IUH5 632 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 DBF4BQ8NFT6 615 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 EPS8L3Q8TE67 593 aaKnown RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 MCRS1Q96EZ8 462 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 RSRC1Q96IZ7 334 aaKnown RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 CPXM1Q96SM3 734 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 TRIM7Q9C029 511 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ADAM7Q9H2U9 754 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
RFFL-205ENST00000415395 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ARL2BPQ9Y2Y0 163 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 ACTL7BQ9Y614 415 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 SCN5AQ14524 2016 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 FAM170AA1A519 330 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 ENPP3O14638 875 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 SNX3O60493 162 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 PFKMP08237 780 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 RARAP10276 462 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 LMO2P25791 158 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 PCSK1P29120 753 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 ELF1P32519 619 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 RFC2P35250 354 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 SCNN1AP37088 669 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 RPL34P49207 117 aaKnown RBP12.09□□□□□ -0.47
RFFL-205ENST00000415395 PSMC1P62191 440 aaKnown RBP12.09□□□□□ -0.47
RFFL-205ENST00000415395 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
RFFL-205ENST00000415395 KRT17Q04695 432 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 PDE4CQ08493 712 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 ACAP1Q15027 740 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 OSTM1Q86WC4 334 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 CCDC25Q86WR0 208 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 METTL23Q86XA0 190 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 ARHGEF2Q92974 986 aaKnown RBP12.09□□□□□ -0.47
RFFL-205ENST00000415395 BTBD6Q96KE9 485 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 HNRNPABQ99729 332 aaKnown RBP12.09□□□□□ -0.47
RFFL-205ENST00000415395 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 CDC42EP4Q9H3Q1 356 aaKnown RBP12.09□□□□□ -0.47
RFFL-205ENST00000415395 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.09□□□□□ -0.47
RFFL-205ENST00000415395 CDH9Q9ULB4 789 aa12.09□□□□□ -0.47
RFFL-205ENST00000415395 B3GAT3O94766 335 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 ERBB2P04626 1255 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 PDGFRBP09619 1106 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 KRT3P12035 628 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.47
RFFL-205ENST00000415395 TYMPP19971 482 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 ACADSBP45954 432 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 SLC8A3P57103 927 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 CYP4A22Q5TCH4 519 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 LRRC38Q5VT99 294 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 TMEM110Q86TL2 294 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 TTC30AQ86WT1 665 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 UBA3Q8TBC4 463 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 SUSD3Q96L08 255 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 HSFY1Q96LI6 401 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 MCEEQ96PE7 176 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 PPCSQ9HAB8 311 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 NOD2Q9HC29 1040 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 DDX43Q9NXZ2 648 aaKnown RBP12.08□□□□□ -0.47
RFFL-205ENST00000415395 TBX21Q9UL17 535 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.47
RFFL-205ENST00000415395 TET1Q8NFU7 2136 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 ATP5HO75947 161 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 TTC4O95801 387 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 SKIV2L2P42285 1042 aaKnown RBP12.08□□□□□ -0.48
RFFL-205ENST00000415395 MARCKSL1P49006 195 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
RFFL-205ENST00000415395 PLCB3Q01970 1234 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 TLE2Q04725 743 aa12.08□□□□□ -0.48
RFFL-205ENST00000415395 STAT4Q14765 748 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms