RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PPP2R5BQ15173 497 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 UBE3CQ15386 1083 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 GAB4Q2WGN9 574 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 RILPL1Q5EBL4 403 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 FBXO47Q5MNV8 452 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 B4GALNT4Q76KP1 1039 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZNF280BQ86YH2 543 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 DCP2Q8IU60 420 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 OR5M3Q8NGP4 307 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 OR14K1Q8NGZ2 314 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 GPR63Q9BZJ6 419 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 NELFAQ9H3P2 528 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 HELLSQ9NRZ9 838 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 SEMA3GQ9NS98 782 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 RPS6KA6Q9UK32 745 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 HSF4Q9ULV5 492 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 CNPY2Q9Y2B0 182 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 X6R8D5 127 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 KIAA1217Q5T5P2 1943 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 PGPEP1LA6NFU8 196 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 H7C0S8 307 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 PYCARD-AS1I3L0S3 204 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZSCAN9O15535 394 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 THAP12O43422 761 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 APBB3O95704 486 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 LY86O95711 162 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ITGB1P05556 798 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ITGA2BP08514 1039 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ITGA5P08648 1049 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TYRP14679 529 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ABCD3P28288 659 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 PRDX5P30044 214 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 PRKAG1P54619 331 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 NFIXQ14938 502 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 FAM69AQ5T7M9 428 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 SNX30Q5VWJ9 437 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 BORAQ6PGQ7 559 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TEPPQ6URK8 271 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 RFX8Q6ZV50 586 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 SLCO6A1Q86UG4 719 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.83□□□□□ -1.96
MCF2-204ENST00000414978 SLC35B2Q8TB61 432 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 NETO1Q8TDF5 533 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 TRAPPC12Q8WVT3 735 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 SEPT1Q8WYJ6 367 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 NEIL1Q96FI4 390 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 MRPL46Q9H2W6 279 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 RC3H2Q9HBD1 1191 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZSCAN32Q9NX65 697 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 MYO1AQ9UBC5 1043 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 TBC1D29Q9UFV1 150 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 ZMYND8Q9ULU4 1186 aaPredicted RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 RRP7AQ9Y3A4 280 aaKnown RBP2.83□□□□□ -1.96
MCF2-204ENST00000414978 TTLL3Q9Y4R7 772 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 FAM205AQ6ZU69 1335 aa2.83□□□□□ -1.96
MCF2-204ENST00000414978 J3KTA2 159 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SYT5O00445 386 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ZBED4O75132 1171 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ENDOD1O94919 500 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GJB1P08034 283 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 FAHP16930 419 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 STAT1P42224 750 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PIK3CGP48736 1102 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 RBM5P52756 815 aaKnown RBP eCLIP2.82□□□□□ -1.96
MCF2-204ENST00000414978 RCAN1P53805 252 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 STARD6P59095 220 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 FHL3Q13643 280 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ADCK5Q3MIX3 580 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PLA1AQ53H76 456 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 TMTC4Q5T4D3 741 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ZNF529Q6P280 563 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 BEND5Q7L4P6 421 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ANKRD13BQ86YJ7 626 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 RASAL3Q86YV0 1011 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SRBD1Q8N5C6 995 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 ARL10Q8N8L6 244 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 FAM46DQ8NEK8 389 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GPR156Q8NFN8 814 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 OR5AN1Q8NGI8 311 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ADAMTS15Q8TE58 950 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ST8SIA4Q92187 359 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 KIF1BPQ96EK5 621 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ZBTB45Q96K62 511 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 ALPK1Q96QP1 1244 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 IMPG2Q9BZV3 1241 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CHST8Q9H2A9 424 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CHMP4BQ9H444 224 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 HEYLQ9NQ87 328 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 EIF2B3Q9NR50 452 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 TLR8Q9NR97 1041 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 HOXC10Q9NYD6 342 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PRR13Q9NZ81 148 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 DAPP1Q9UN19 280 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 AGAP1Q9UPQ3 857 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CDYLQ9Y232 598 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 FLT1P17948 1338 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ZNF236Q9UL36 1845 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 FITM1A5D6W6 292 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms