RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MYO16Q9Y6X6 1858 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CTAGE9A4FU28 777 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 HIDE1A8MVS5 230 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 SEC24AO95486 1093 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CNPP09543 421 aaKnown RBP16.28■□□□□ 0.2
SHMT2-202ENST00000414700 KRT3P12035 628 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 IFRD2Q12894 506 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-202ENST00000414700 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 FEZF2Q8TBJ5 459 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 SEPT5Q99719 369 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-202ENST00000414700 SELENOOQ9BVL4 669 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 PLVAPQ9BX97 442 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 OXCT2Q9BYC2 517 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-202ENST00000414700 ULBP1Q9BZM6 244 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 MRPL47Q9HD33 250 aaKnown RBP16.28■□□□□ 0.2
SHMT2-202ENST00000414700 SCINQ9Y6U3 715 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 TRIOBPQ9H2D6 2365 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 PLXNA3P51805 1871 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 ATG2AQ2TAZ0 1938 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CTAGE15A4D2H0 777 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 TMEM191CA6NGB0 347 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 SIGLEC16A6NMB1 481 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 TNFRSF10BO14763 440 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 NCK2O43639 380 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CAPN15O75808 1086 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 ABLIM3O94929 683 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CTAGE8P0CG41 777 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 IRS1P35568 1242 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 FLT3P36888 993 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 SLC6A3Q01959 620 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 DCUN1D2Q6PH85 259 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CTAGE6Q86UF2 777 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CTAGE4Q8IX94 777 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 ZNF461Q8TAF7 563 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 NKX2-4Q9H2Z4 354 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 CYLDQ9NQC7 956 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 WDR35Q9P2L0 1181 aa16.28■□□□□ 0.2
SHMT2-202ENST00000414700 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-202ENST00000414700 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-202ENST00000414700 RNF40O75150 1001 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 CXCL14O95715 111 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 ATP1A1P05023 1023 aaKnown RBP16.27■□□□□ 0.2
SHMT2-202ENST00000414700 USP17L7P0C7H9 530 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 RHOXF2BP0C7M4 288 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SPATA31D3P0C874 917 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 ACADSBP45954 432 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SLC5A3P53794 718 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 PLPP4Q5VZY2 271 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 WDR93Q6P2C0 686 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 VSTM1Q6UX27 236 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 HFE2Q6ZVN8 426 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SLFN11Q7Z7L1 901 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 GPATCH11Q8N954 259 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SPPL2BQ8TCT7 592 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 TGS1Q96RS0 853 aaKnown RBP16.27■□□□□ 0.2
SHMT2-202ENST00000414700 RHOXF2Q9BQY4 288 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 ENTPD7Q9NQZ7 604 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 RWDD3Q9Y3V2 267 aa16.27■□□□□ 0.2
SHMT2-202ENST00000414700 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.19
SHMT2-202ENST00000414700 ATF2P15336 505 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 ATF6P18850 670 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 USP46P62068 366 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 RAB33AQ14088 237 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 TDHQ8IZJ6 230 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 MICALL1Q8N3F8 863 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 TLR9Q9NR96 1032 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 ALG6Q9Y672 507 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 YJEFN3A6XGL0 299 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 ANKRD65E5RJM6 399 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 E7ENQ6 273 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 MYO1FO00160 1098 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 HAPLN1P10915 354 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-202ENST00000414700 MAGEA11P43364 429 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 PGFP49763 221 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 DNA2P51530 1060 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 ERVK-21P61565 698 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 MRPS5P82675 430 aaKnown RBP16.26■□□□□ 0.19
SHMT2-202ENST00000414700 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 MTMR3Q13615 1198 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
SHMT2-202ENST00000414700 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-202ENST00000414700 TLR10Q9BXR5 811 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 RXFP1Q9HBX9 757 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 PNPLA8Q9NP80 782 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 FNIP2Q9P278 1114 aa16.26■□□□□ 0.19
SHMT2-202ENST00000414700 AFF4Q9UHB7 1163 aaKnown RBP16.26■□□□□ 0.19
SHMT2-202ENST00000414700 C2orf71A6NGG8 1288 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 TCF4P15884 667 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 BMP8BP34820 402 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 RGS19P49795 217 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 DAOAP59103 153 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms