RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CCDC28AQ8IWP9 274 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 SYTL1Q8IYJ3 562 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 XAGE5Q8WWM1 108 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 WDR24Q96S15 920 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 PCDHAC1Q9H158 963 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 TMEM8AQ9HCN3 771 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 TMOD4Q9NZQ9 345 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 TLK1Q9UKI8 766 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 ZMYND8Q9ULU4 1186 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 CA14Q9ULX7 337 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 DAAM1Q9Y4D1 1078 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 INSL6Q9Y581 213 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 A8MVJ9 347 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 EXOC5O00471 708 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 PODXLO00592 558 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 KIAA0355O15063 1070 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 PMPCBO75439 489 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 NPSP0C0P6 89 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 FAM163BP0C2L3 166 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 NTSR1P30989 418 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 CYP2C18P33260 490 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 CLK3P49761 638 aaKnown RBP4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 CCT8P50990 548 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 PDE1AP54750 535 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 EEFSECP57772 596 aaKnown RBP4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 NSUN2Q08J23 767 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 FHL3Q13643 280 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ATP1A4Q13733 1029 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ST3GAL2Q16842 350 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ABLIM2Q6H8Q1 611 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 FBXO38Q6PIJ6 1188 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ZNF804AQ7Z570 1209 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 LRRC71Q8N4P6 559 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 METTL25Q8N6Q8 603 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 FAM98AQ8NCA5 519 aaKnown RBP4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ABHD11Q8NFV4 315 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 PMM1Q92871 262 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 SARAFQ96BY9 339 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 WDYHV1Q96HA8 205 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 PRR25Q96S07 402 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 SEMA4GQ9NTN9 838 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 STEAP1Q9UHE8 339 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 SLC39A10Q9ULF5 831 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 ADAMTS5Q9UNA0 930 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 LRCH1Q9Y2L9 728 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 SLC27A6Q9Y2P4 619 aa4.51□□□□□ -1.69
HMGB1P11-201ENST00000413899 A0A087WV62 115 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 QSOX1O00391 747 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 ZNF213O14771 459 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 SPRY2O43597 315 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 CCNT2O60583 730 aaKnown RBP4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 CBFA2T3O75081 653 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 PEX14O75381 377 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 MYCLP12524 364 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 HMGA2P52926 109 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 SUMO2P61956 95 aaKnown RBP4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 E2F1Q01094 437 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 TNFAIP2Q03169 654 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 GPS1Q13098 491 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 MTAPQ13126 283 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 ACOX1Q15067 660 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 RAB30Q15771 203 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 FAM153CQ494X1 144 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 SFTPA1Q8IWL2 248 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 SIRT6Q8N6T7 355 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 SUN3Q8TAQ9 357 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 C18orf8Q96DM3 657 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 DPCDQ9BVM2 203 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 PRDM13Q9H4Q3 707 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 RXFP3Q9NSD7 469 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 NKX1-2Q9UD57 310 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 CDC23Q9UJX2 597 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 AMFRQ9UKV5 643 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 ST3GAL5Q9UNP4 418 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 DTNAQ9Y4J8 743 aa4.5□□□□□ -1.69
HMGB1P11-201ENST00000413899 FFAR2O15552 330 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 DHHO43323 396 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 PROP1O75360 226 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 C1QL1O75973 258 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 GLP2RO95838 553 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 LDHAP00338 332 aaKnown RBP4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 PECAM1P16284 738 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 ENGP17813 658 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 STARD3Q14849 445 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 TMTC4Q5T4D3 741 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 TSTD2Q5T7W7 516 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 CEP85Q6P2H3 762 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 TLDC1Q6P9B6 456 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 C1orf228Q6PIY5 440 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 CLEC9AQ6UXN8 241 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 PTCHD4Q6ZW05 846 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 RASAL3Q86YV0 1011 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 C11orf44Q8N8P7 122 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms