RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	ZNF840P	A6NDX5	716 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	MOSPD3	O75425	235 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	ZDHHC11B	P0C7U3	371 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	RALA	P11233	206 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	UNG	P13051	313 aa	Predicted RBP	13.82	□□□□□ -0.2
SF1-206	ENST00000413725	PFKL	P17858	780 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	TUB	P50607	506 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	DAOA	P59103	153 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	CENPC	Q03188	943 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	PTPN20	Q4JDL3	420 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	SNX30	Q5VWJ9	437 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	HGSNAT	Q68CP4	663 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	TADA2B	Q86TJ2	420 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	ZDHHC17	Q8IUH5	632 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	TC2N	Q8N9U0	490 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	C18orf8	Q96DM3	657 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	ASB2	Q96Q27	587 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	PCDHB18P	Q96TA0	734 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SF1-206	ENST00000413725	TRIM62	Q9BVG3	475 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	DEF6	Q9H4E7	631 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	TASP1	Q9H6P5	420 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	TRPC7	Q9HCX4	862 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	PRKAG3	Q9UGI9	489 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.82	□□□□□ -0.2
SF1-206	ENST00000413725	NAGPA	Q9UK23	515 aa		13.82	□□□□□ -0.2
SF1-206	ENST00000413725	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.82	□□□□□ -0.2
SF1-206	ENST00000413725	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.81	□□□□□ -0.2
SF1-206	ENST00000413725	TRAV19	A0A0A6YYK7	116 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725		A0A1W2PQH9	124 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	SSU72P8	A0A1W2PR75	194 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	PLEK	P08567	350 aa	Predicted RBP	13.81	□□□□□ -0.2
SF1-206	ENST00000413725	SP100	P23497	879 aa	Predicted RBP	13.81	□□□□□ -0.2
SF1-206	ENST00000413725	YWHAG	P61981	247 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SF1-206	ENST00000413725	CDK17	Q00537	523 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	HECTD3	Q5T447	861 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	BTBD8	Q5XKL5	378 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	TXNDC8	Q6A555	127 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	OR6B2	Q6IFH4	312 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	TOGARAM2	Q6ZUX3	1019 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	SCUBE3	Q8IX30	993 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	PLCD3	Q8N3E9	789 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	MAB21L3	Q8N8X9	362 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	FAM149B1	Q96BN6	582 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	MCRS1	Q96EZ8	462 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	RPGRIP1	Q96KN7	1286 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	PANX2	Q96RD6	677 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	MYADM	Q96S97	322 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.81	□□□□□ -0.2
SF1-206	ENST00000413725	NACA2	Q9H009	215 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	CLIC5	Q9NZA1	410 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	ARHGAP20	Q9P2F6	1191 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	STRIP2	Q9ULQ0	834 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	MYOF	Q9NZM1	2061 aa		13.81	□□□□□ -0.2
SF1-206	ENST00000413725	DDX3X	O00571	662 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	PAPSS1	O43252	624 aa	Predicted RBP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	GABBR2	O75899	941 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	ERBB2	P04626	1255 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	CALB1	P05937	261 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	CKM	P06732	381 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	GZMA	P12544	262 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	LAMP2	P13473	410 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	MMP8	P22894	467 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	AVPR1A	P37288	418 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	EIF4A3	P38919	411 aa	Known RBP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	GABRB2	P47870	512 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	GSDMD	P57764	484 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	STXBP5	Q5T5C0	1151 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	ACAD10	Q6JQN1	1059 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	WDR59	Q6PJI9	974 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	MMS22L	Q6ZRQ5	1243 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	FAM183BP	Q6ZVS7	135 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	RSRC2	Q7L4I2	434 aa	Known RBP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	SCD5	Q86SK9	330 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	PHF13	Q86YI8	300 aa	Predicted RBP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	ADHFE1	Q8IWW8	467 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	SLC30A5	Q8TAD4	765 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	CLEC4C	Q8WTT0	213 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	NDRG1	Q92597	394 aa	Known RBP	13.8	□□□□□ -0.2
SF1-206	ENST00000413725	CCDC42	Q96M95	316 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	C11orf70	Q9BRQ4	267 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	NMUR1	Q9HB89	426 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	ADAM22	Q9P0K1	906 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	WDR35	Q9P2L0	1181 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	EPS15L1	Q9UBC2	864 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	TJP2	Q9UDY2	1190 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	ADAMTS1	Q9UHI8	967 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	UNC80	Q8N2C7	3258 aa		13.8	□□□□□ -0.2
SF1-206	ENST00000413725	FAM170A	A1A519	330 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	C2orf78	A6NCI8	922 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	YJEFN3	A6XGL0	299 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	TMCO5B	A8MYB1	307 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	C2CD4D	B7Z1M9	353 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725		E7ENQ6	273 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	NRG2	O14511	850 aa	Predicted RBP	13.79	□□□□□ -0.2
SF1-206	ENST00000413725	AKR1B10	O60218	316 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	TLR5	O60602	858 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	RTN2	O75298	545 aa		13.79	□□□□□ -0.2

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