RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TRIM24O15164 1050 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 ABL1P00519 1130 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 TMEM191BP0C7N4 346 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 PDCP20941 246 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 GARTP22102 1010 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 WARSP23381 471 aaKnown RBP10.17□□□□□ -0.78
RFFL-203ENST00000413582 WASP42768 502 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 CACNA2D1P54289 1103 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 GAD2Q05329 585 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 TAF10Q12962 218 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 MYO1EQ12965 1108 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 GRIK2Q13002 908 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 PLEKHG6Q3KR16 790 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 MDH1BQ5I0G3 518 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 L1TD1Q5T7N2 865 aaKnown RBP10.17□□□□□ -0.78
RFFL-203ENST00000413582 EGFLAMQ63HQ2 1017 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 TOGARAM2Q6ZUX3 1019 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 GLRX5Q86SX6 157 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 SLCO6A1Q86UG4 719 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 NAT16Q8N8M0 369 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
RFFL-203ENST00000413582 MYCBPAPQ8TBZ2 947 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 HNRNPLLQ8WVV9 542 aaKnown RBP10.17□□□□□ -0.78
RFFL-203ENST00000413582 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 ZNF419Q96HQ0 510 aaPredicted RBP10.17□□□□□ -0.78
RFFL-203ENST00000413582 SLITRK1Q96PX8 696 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 ACOX2Q99424 681 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
RFFL-203ENST00000413582 CBWD1Q9BRT8 395 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 DEC1Q9P2X7 70 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 DKK4Q9UBT3 224 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 SUSD2Q9UGT4 822 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 PCOLCE2Q9UKZ9 415 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 PCDHB9Q9Y5E1 797 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 MAST4O15021 2626 aa10.17□□□□□ -0.78
RFFL-203ENST00000413582 KALRNO60229 2985 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 COCHO43405 550 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
RFFL-203ENST00000413582 PDGFRBP09619 1106 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 NTSR1P30989 418 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 CASP5P51878 434 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 NUCB2P80303 420 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 GSE1Q14687 1217 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 BTBD8Q5XKL5 378 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 BBS7Q8IWZ6 715 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 OR5B17Q8NGF7 314 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 RASSF8Q8NHQ8 419 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
RFFL-203ENST00000413582 HPDLQ96IR7 371 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 LRIG1Q96JA1 1093 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 GABRG3Q99928 467 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 FGFBP2Q9BYJ0 223 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 ZNF518BQ9C0D4 1074 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 FAM124BQ9H5Z6 455 aaPredicted RBP10.16□□□□□ -0.78
RFFL-203ENST00000413582 MRPL44Q9H9J2 332 aaKnown RBP10.16□□□□□ -0.78
RFFL-203ENST00000413582 SPHK2Q9NRA0 654 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 INTS13Q9NVM9 706 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 CACNA2D2Q9NY47 1150 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 CHMP5Q9NZZ3 219 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 EXOC7Q9UPT5 735 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 APOBEC2Q9Y235 224 aaKnown RBP10.16□□□□□ -0.78
RFFL-203ENST00000413582 STARD13Q9Y3M8 1113 aa10.16□□□□□ -0.78
RFFL-203ENST00000413582 MYH10P35580 1976 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 SHROOM3Q8TF72 1996 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 NUMA1Q14980 2115 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 LDHAP00338 332 aaKnown RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 LONP1P36776 959 aaKnown RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 IFRD2Q12894 506 aaPredicted RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 ANO4Q32M45 955 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 PREPLQ4J6C6 727 aaPredicted RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 TDRD10Q5VZ19 366 aaKnown RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 GRAMD4Q6IC98 578 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 DYMQ7RTS9 669 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 TMEM25Q86YD3 366 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 CHPFQ8IZ52 775 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 RGL4Q8IZJ4 473 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 BAHD1Q8TBE0 780 aaPredicted RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 ADAM32Q8TC27 787 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 WBP2Q969T9 261 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 DNAJC19Q96DA6 116 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 ERLEC1Q96DZ1 483 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 ANKRD36BP1Q96IX9 119 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 MRGPRX1Q96LB2 322 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 MRPL45Q9BRJ2 306 aaKnown RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 ZDHHC5Q9C0B5 715 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 ELOVL4Q9GZR5 314 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 SLC6A17Q9H1V8 727 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 OLFML3Q9NRN5 406 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 DNAJC17Q9NVM6 304 aaKnown RBP10.15□□□□□ -0.78
RFFL-203ENST00000413582 TOR4AQ9NXH8 423 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 TBC1D7Q9P0N9 293 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 RAD54BQ9Y620 910 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 CKAP5Q14008 2032 aa10.15□□□□□ -0.78
RFFL-203ENST00000413582 PRRT4C9JH25 899 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 CLDN5O00501 218 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms