RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 UBXN6Q9BZV1 441 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 FBRSL1Q9HCM7 1045 aaKnown RBP18.34■□□□□ 0.53
HSPG2-204ENST00000412328 FAM186AA6NE01 2351 aa18.33■□□□□ 0.53
HSPG2-204ENST00000412328 MUC22E2RYF6 1773 aaPredicted RBP18.33■□□□□ 0.53
HSPG2-204ENST00000412328 ZFHX2Q9C0A1 2572 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 TRDMT1O14717 391 aaKnown RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 TLR5O60602 858 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 GABBR2O75899 941 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 CALCAP01258 141 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 PAEPP09466 180 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 MBL2P11226 248 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 ERCC5P28715 1186 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 MRE11P49959 708 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 YWHAEP62258 255 aaKnown RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 ZNF528Q3MIS6 628 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 MIIPQ5JXC2 388 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 TRIM65Q6PJ69 517 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 TMEM270Q6UE05 265 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 THAP9Q9H5L6 903 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 LMAN1LQ9HAT1 526 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 TLR8Q9NR97 1041 aaKnown RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 SPATA6Q9NWH7 488 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 C2orf42Q9NWW7 574 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 CFAP97Q9P2B7 532 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 FBXO4Q9UKT5 387 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.33■□□□□ 0.52
HSPG2-204ENST00000412328 WDR87Q6ZQQ6 2873 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 CFAP54Q96N23 3096 aa18.33■□□□□ 0.52
HSPG2-204ENST00000412328 GVINP1Q7Z2Y8 2422 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 A0A1W2PQH9 124 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 SCAMP3O14828 347 aaKnown RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 XPO1O14980 1071 aaKnown RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 NCAM2O15394 837 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 FGFR1OPO95684 399 aaKnown RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 ABL1P00519 1130 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 VDRP11473 427 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 OPRD1P41143 372 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 PLA2G4AP47712 749 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 IFNAR2P48551 515 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 BCAT1P54687 386 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 APBA1Q02410 837 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 PDE4CQ08493 712 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 SGO2Q562F6 1265 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 CC2D1AQ6P1N0 951 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 PKN3Q6P5Z2 889 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 KLHDC10Q6PID8 442 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 RRAGAQ7L523 313 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 CPA6Q8N4T0 437 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 ZNF276Q8N554 614 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 RBBP8NLQ8NC74 664 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 KLF16Q9BXK1 252 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 SIX2Q9NPC8 291 aa18.32■□□□□ 0.52
HSPG2-204ENST00000412328 AJAP1Q9UKB5 411 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-204ENST00000412328 NYNRINQ9P2P1 1898 aaKnown RBP18.31■□□□□ 0.52
HSPG2-204ENST00000412328 E2F8A0AVK6 867 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 GTPBP10A4D1E9 387 aaKnown RBP18.31■□□□□ 0.52
HSPG2-204ENST00000412328 PAPSS2O95340 614 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-204ENST00000412328 TBX18O95935 607 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 BST2Q10589 180 aaKnown RBP18.31■□□□□ 0.52
HSPG2-204ENST00000412328 LRRC32Q14392 662 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 DGKKQ5KSL6 1271 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 PM20D1Q6GTS8 502 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 LCLAT1Q6UWP7 414 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 ALYREFQ86V81 257 aaKnown RBP18.31■□□□□ 0.52
HSPG2-204ENST00000412328 DDX42Q86XP3 938 aaKnown RBP eCLIP18.31■□□□□ 0.52
HSPG2-204ENST00000412328 CLIC5Q9NZA1 410 aa18.31■□□□□ 0.52
HSPG2-204ENST00000412328 RIF1Q5UIP0 2472 aaKnown RBP18.3■□□□□ 0.52
HSPG2-204ENST00000412328 PRR23AA6NEV1 266 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 BECN2A8MW95 431 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 MDM4O15151 490 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 NFATC1O95644 943 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 SLC9A1P19634 815 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 CETN1Q12798 172 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 ASCL5Q7RTU5 278 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 C12orf40Q86WS4 652 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 PHTF2Q8N3S3 785 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 ZBTB44Q8NCP5 570 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 TTC16Q8NEE8 873 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 PCDHB4Q9Y5E5 795 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 TNRC6BQ9UPQ9 1833 aaKnown RBP18.3■□□□□ 0.52
HSPG2-204ENST00000412328 GPR179Q6PRD1 2367 aa18.3■□□□□ 0.52
HSPG2-204ENST00000412328 K7ESF4 209 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 LAMTOR5O43504 91 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 LILRB5O75023 590 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 EGFP01133 1207 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 SETSIPP0DME0 302 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 RARGP13631 454 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 CD19P15391 556 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 BRD2P25440 801 aaKnown RBP18.29■□□□□ 0.52
HSPG2-204ENST00000412328 HOXC13P31276 330 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 SATB1Q01826 763 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 MESP2Q0VG99 397 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 MAN2A1Q16706 1144 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 TSSK4Q6SA08 328 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 Q6ZNB5 142 aa18.29■□□□□ 0.52
HSPG2-204ENST00000412328 BBS7Q8IWZ6 715 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 857.8 ms