RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 K7EQS6 105 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 TLR5O60602 858 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 ZDHHC11BP0C7U3 371 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 SLC6A11P48066 632 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 DGKEP52429 567 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 ENPEPQ07075 957 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 BECN1Q14457 450 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 EDRF1Q3B7T1 1238 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 LY6G5CQ5SRR4 150 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 KRT39Q6A163 491 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 RHBDF2Q6PJF5 856 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 CLEC20AQ6ZU45 233 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 GPRIN1Q7Z2K8 1008 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 C12orf40Q86WS4 652 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 NETO1Q8TDF5 533 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 CYFIP2Q96F07 1278 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 PNKPQ96T60 521 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 RTKNQ9BST9 563 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 DNAI2Q9GZS0 605 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 ARRDC1-AS1Q9H2J1 176 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 RMND1Q9NWS8 449 aa23.59■■□□□ 1.37
MSH6-202ENST00000411819 CILPO75339 1184 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 APODP05090 189 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 EPB41P11171 864 aaKnown RBP23.58■■□□□ 1.37
MSH6-202ENST00000411819 MXI1P50539 228 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 CCDC6Q16204 474 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 CCDC33Q8N5R6 958 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 OTUB2Q96DC9 234 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 HNRNPABQ99729 332 aaKnown RBP23.58■■□□□ 1.37
MSH6-202ENST00000411819 TPSD1Q9BZJ3 242 aa23.58■■□□□ 1.37
MSH6-202ENST00000411819 ANTXRLA6NF34 631 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.57■■□□□ 1.36
MSH6-202ENST00000411819 CETN3O15182 167 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 CYP26A1O43174 497 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 EPN2O95208 641 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 KAT7O95251 611 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 ACO1P21399 889 aaKnown RBP23.57■■□□□ 1.36
MSH6-202ENST00000411819 GTF2H1P32780 548 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 EIF2DP41214 584 aaKnown RBP23.57■■□□□ 1.36
MSH6-202ENST00000411819 PGFP49763 221 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 GAD2Q05329 585 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 ZNF394Q53GI3 561 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 TTC30AQ86WT1 665 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 BBS7Q8IWZ6 715 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 LOXL4Q96JB6 756 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 ARHGEF4Q9NR80 690 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 MMP17Q9ULZ9 603 aa23.57■■□□□ 1.36
MSH6-202ENST00000411819 DCDC2BA2VCK2 349 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 FOXD2O60548 495 aaPredicted RBP23.56■■□□□ 1.36
MSH6-202ENST00000411819 MESP2Q0VG99 397 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 ELF2Q15723 593 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 AASDHQ4L235 1098 aaPredicted RBP23.56■■□□□ 1.36
MSH6-202ENST00000411819 DCAF17Q5H9S7 520 aaPredicted RBP23.56■■□□□ 1.36
MSH6-202ENST00000411819 TCERG1LQ5VWI1 586 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 BTBD8Q5XKL5 378 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 ANO7Q6IWH7 933 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 SFTPA1Q8IWL2 248 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 FMR1NBQ8N0W7 255 aaPredicted RBP23.56■■□□□ 1.36
MSH6-202ENST00000411819 C12orf50Q8NA57 414 aaPredicted RBP23.56■■□□□ 1.36
MSH6-202ENST00000411819 WHAMMQ8TF30 809 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 WBP2Q969T9 261 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 TSG101Q99816 390 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 EBF1Q9UH73 591 aa23.56■■□□□ 1.36
MSH6-202ENST00000411819 HHLA1C9JL84 531 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 DCLK1O15075 740 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 GDF9O60383 454 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 STX10O60499 249 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 TBX18O95935 607 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 GBP1P32455 592 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 TIE1P35590 1138 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 PRCPP42785 496 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 MRPS21P82921 87 aaKnown RBP23.55■■□□□ 1.36
MSH6-202ENST00000411819 GOLGA8FQ08AF8 430 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 GOLGA8DPQ0D2H9 430 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 SF3A2Q15428 464 aaKnown RBP23.55■■□□□ 1.36
MSH6-202ENST00000411819 ANO4Q32M45 955 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 PLK5Q496M5 336 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 ALLCQ8N6M5 410 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 NAT16Q8N8M0 369 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 FBXL13Q8NEE6 735 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 SEMA4DQ92854 862 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 PNPLA8Q9NP80 782 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 SCML2Q9UQR0 700 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 PCDHA5Q9Y5H7 936 aa23.55■■□□□ 1.36
MSH6-202ENST00000411819 KLF8O95600 359 aaPredicted RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 ATP5C1P36542 298 aaKnown RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 GRIA2P42262 883 aa23.54■■□□□ 1.36
MSH6-202ENST00000411819 PPP1R26Q5T8A7 1209 aaPredicted RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 ZNF658Q5TYW1 1059 aaPredicted RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 TXNDC5Q8NBS9 432 aaKnown RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 ERCC4Q92889 916 aaPredicted RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 ZC3H10Q96K80 434 aaKnown RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 HEXIM2Q96MH2 286 aaKnown RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 SPHK2Q9NRA0 654 aa23.54■■□□□ 1.36
MSH6-202ENST00000411819 OSER1Q9NX31 292 aa23.54■■□□□ 1.36
MSH6-202ENST00000411819 RAB20Q9NX57 234 aa23.54■■□□□ 1.36
MSH6-202ENST00000411819 LSM7Q9UK45 103 aaKnown RBP23.54■■□□□ 1.36
MSH6-202ENST00000411819 INVSQ9Y283 1065 aa23.54■■□□□ 1.36
MSH6-202ENST00000411819 A0A1W2PQH9 124 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 SLC30A4O14863 429 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms