RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 COL5A3P25940 1745 aaPredicted RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 DDX60LQ5H9U9 1706 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 DOT1LQ8TEK3 1739 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 NHSQ6T4R5 1651 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 FLT1P17948 1338 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 A0A0U1RQJ8 604 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 MACROD2A1Z1Q3 448 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 B4DLN1 442 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 UBE2Q2LH0YL09 131 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CCDC188H7C350 402 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CHUKO15111 745 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PRKAB2O43741 272 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 GFPT2O94808 682 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PLEKHA8P1O95397 391 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 FAM107AO95990 144 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CYP17A1P05093 508 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SERPING1P05155 500 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PAEPP09466 180 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 OR52Z1P0C646 297 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CYP19A1P11511 503 aaPredicted RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 NR1D1P20393 614 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PTX3P26022 381 aaPredicted RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 LSP1P33241 339 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 RDXP35241 583 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 HSPA9P38646 679 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CCT5P48643 541 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 GNGT1P63211 74 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 ADAM8P78325 824 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 ASIC1P78348 528 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SQSTM1Q13501 440 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 GRM4Q14833 912 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SLMAPQ14BN4 828 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PTPN21Q16825 1174 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 TMEM266Q2M3C6 531 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 ASTE1Q2TB18 679 aaPredicted RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SLC9C1Q4G0N8 1177 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CAVIN4Q5BKX8 364 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 EARS2Q5JPH6 523 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PIK3R6Q5UE93 754 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CENPPQ6IPU0 288 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 UNC13DQ70J99 1090 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 GAREM2Q75VX8 874 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 IQCKQ8N0W5 287 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SRBD1Q8N5C6 995 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 AMER2Q8N7J2 671 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 ATRIPQ8WXE1 791 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 NKD2Q969F2 451 aaPredicted RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CHFRQ96EP1 664 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CALML4Q96GE6 196 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PBKQ96KB5 322 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CAPZA3Q96KX2 299 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 ATP6V1G3Q96LB4 118 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 TUBGCP5Q96RT8 1024 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 NAP1L4Q99733 375 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SPZ1Q9BXG8 430 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 FAM129AQ9BZQ8 928 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 ZMYND12Q9H0C1 365 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 BLZF1Q9H2G9 400 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 NDST4Q9H3R1 872 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 VCPKMTQ9H867 229 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CNOT10Q9H9A5 744 aaKnown RBP3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 KANSL2Q9H9L4 492 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 C6orf50Q9HD87 102 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 PLCB1Q9NQ66 1216 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 BARHL2Q9NY43 387 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 KCMF1Q9P0J7 381 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 CEP72Q9P209 647 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 HDAC6Q9UBN7 1215 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 LRWD1Q9UFC0 647 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SWAP70Q9UH65 585 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 SIK3Q9Y2K2 1263 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 GDAQ9Y2T3 454 aa3.82□□□□□ -1.8
RNU6-55P-201ENST00000411092 COL24A1Q17RW2 1714 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 SLIT2O94813 1529 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 KDM3AQ9Y4C1 1321 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 A0A0A6YYK5 440 aaPredicted RBP3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 UBE2QL1A1L167 161 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 TRIM49BA6NDI0 452 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 H0YHG0 523 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 GCOM1H8Y6P7 765 aaPredicted RBP3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 PES1O00541 588 aaKnown RBP3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 PPP1R12AO14974 1030 aaPredicted RBP3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 PRDM1O75626 825 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 ADH4P08319 380 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 CCDC172P0C7W6 258 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 MYZAPP0CAP1 466 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 MYBP10242 640 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 MYBL2P10244 700 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 SLC9A1P19634 815 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 GPTP24298 496 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 CASP1P29466 404 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 CDC25AP30304 524 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 HNRNPH1P31943 449 aaKnown RBP3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 SLC8A1P32418 973 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 MAP2K2P36507 400 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 MDH1P40925 334 aaKnown RBP3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 MAGEA1P43355 309 aa3.81□□□□□ -1.8
RNU6-55P-201ENST00000411092 SCNN1GP51170 649 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms