RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 F8VP50 259 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 H0Y8X5 98 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PYCARD-AS1I3L0S3 204 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 K7ENM7 598 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TULP1O00294 542 aaPredicted RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 LAD1O00515 517 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNK3O14649 394 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ENC1O14682 589 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 GABRDO14764 452 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 NPC1O15118 1278 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRIM24O15164 1050 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC28A2O43868 658 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRAK2O60296 914 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SYNCRIPO60506 623 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 DTNBO60941 627 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 RFPL3O75679 317 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 IL18RAPO95256 599 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 LDOC1O95751 146 aaPredicted RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 OAS1P00973 400 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 C1SP09871 688 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACADMP11310 421 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 FDPSP14324 419 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 BDNFP23560 247 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 POLR2BP30876 1174 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 IL12RB1P42701 662 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 GRIA4P48058 902 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 DGKGP49619 791 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CSNK1EP49674 416 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACOT2P49753 483 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TPMTP51580 245 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 AFF3P51826 1226 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 FOSBP53539 338 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMPRSS3P57727 454 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP46P62068 366 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 NOP14P78316 857 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 RBP5P82980 135 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TFAMQ00059 246 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 BNC1Q01954 994 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SRSF1Q07955 248 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 RAD51AP2Q09MP3 1159 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCDC173Q0VFZ6 552 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNH2Q12809 1159 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TAF10Q12962 218 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 MYO1EQ12965 1108 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ORC1Q13415 861 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ILKQ13418 452 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 NUMA1Q14980 2115 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 POSTNQ15063 836 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKRD1Q15327 319 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 E2F5Q15329 346 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZRSR1Q15695 479 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIF19Q2TAC6 998 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 FUT11Q495W5 492 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PKDCCQ504Y2 493 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TTC38Q5R3I4 469 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 HECTD3Q5T447 861 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 HES3Q5TGS1 186 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 BROXQ5VW32 411 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TDRD10Q5VZ19 366 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 EGFLAMQ63HQ2 1017 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ADALQ6DHV7 355 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM171BQ6P995 826 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCSK4Q6UW60 755 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 DPH6Q7L8W6 267 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 HS2ST1Q7LGA3 356 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ADAT2Q7Z6V5 191 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMEM25Q86YD3 366 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMPRSS6Q8IU80 811 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 FMNL3Q8IVF7 1028 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 BBS7Q8IWZ6 715 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SPACA3Q8IXA5 215 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ADGRF2Q8IZF7 708 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 LSMEM2Q8N112 164 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CACTIN-AS1Q8N1I8 211 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 MYCT1Q8N699 235 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CSGALNACT2Q8N6G5 542 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TOP6BLQ8N6T0 577 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 LRRC52Q8N7C0 313 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 IGSF22Q8N9C0 903 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SYT2Q8N9I0 419 aaPredicted RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF248Q8NDW4 579 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PDZD8Q8NEN9 1154 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 C1orf216Q8TAB5 229 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CACTINQ8WUQ7 758 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 UCMAQ8WVF2 138 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SNX19Q92543 992 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRCCQ92733 491 aaPredicted RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ERLEC1Q96DZ1 483 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SIPA1Q96FS4 1042 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 MED8Q96G25 268 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMEM176AQ96HP8 235 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CDK5RAP3Q96JB5 506 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 C8orf48Q96LL4 319 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 LGMNQ99538 433 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PKMYT1Q99640 499 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 DUSP9Q99956 384 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SYT15Q9BQS2 421 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TTLL2Q9BWV7 592 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 BBS2Q9BXC9 721 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 MKRN2Q9H000 416 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms