RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 ARHGAP26Q9UNA1 814 aa25.08■■□□□ 1.61
UBE2E3-202ENST00000410062 HELZP42694 1942 aaKnown RBP25.08■■□□□ 1.6
UBE2E3-202ENST00000410062 TLR5O60602 858 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 MBL2P11226 248 aaPredicted RBP25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 KRT9P35527 623 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 TUBP50607 506 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 UBASH3AP57075 661 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 SLC7A9P82251 487 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 MEA1Q16626 185 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 IER5LQ5T953 404 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 PM20D1Q6GTS8 502 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 HSFY1Q96LI6 401 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 ST7Q9NRC1 585 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 NUDT5Q9UKK9 219 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 CA14Q9ULX7 337 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 PCDHGC3Q9UN70 934 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 CPQQ9Y646 472 aa25.07■■□□□ 1.6
UBE2E3-202ENST00000410062 TMEM221A6NGB7 291 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 M0R296 226 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 ZNF263O14978 683 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 TBX18O95935 607 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 RARGP13631 454 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 SOX5P35711 763 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 BHLHA9Q7RTU4 235 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 SH3RF2Q8TEC5 729 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 NACA2Q9H009 215 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 CYLDQ9NQC7 956 aa25.06■■□□□ 1.6
UBE2E3-202ENST00000410062 A0A1W2PQC6 194 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 STAT1P42224 750 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 YWHAGP61981 247 aaKnown RBP eCLIP25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 ZNF77Q15935 545 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 TAF3Q5VWG9 929 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 CACNA2D4Q7Z3S7 1137 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 NOP9Q86U38 636 aaKnown RBP25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 WDTC1Q8N5D0 677 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 CNGB3Q9NQW8 809 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 WNT16Q9UBV4 365 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 LEFTY2O00292 366 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 CHADO15335 359 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 PSEN1P49768 467 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 SIX5Q8N196 739 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 CLEC4CQ8WTT0 213 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 DDX1Q92499 740 aaKnown RBP25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 IRF7Q92985 503 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 MIS12Q9H081 205 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 THG1LQ9NWX6 298 aaKnown RBP25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 IFNKQ9P0W0 207 aa25.05■■□□□ 1.6
UBE2E3-202ENST00000410062 KRBA1A5PL33 1030 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 YJEFN3A6XGL0 299 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 E7ENQ6 273 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 MDM4O15151 490 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 DAOAP59103 153 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 PFKPQ01813 784 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 USP4Q13107 963 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 MTF1Q14872 753 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 ARHGAP29Q52LW3 1261 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 ARHGAP18Q8N392 663 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 EPS8L1Q8TE68 723 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 STK32AQ8WU08 396 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 ZFRQ96KR1 1074 aaKnown RBP25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 C1QTNF1Q9BXJ1 281 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 SLC4A5Q9BY07 1137 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 LHX5Q9H2C1 402 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 PDCL3Q9H2J4 239 aa25.04■■□□□ 1.6
UBE2E3-202ENST00000410062 TICRRQ7Z2Z1 1910 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 ARNTLO00327 626 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 PDGFBP01127 241 aaPredicted RBP25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 RALAP11233 206 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 ATP5C1P36542 298 aaKnown RBP25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 RPL34P49207 117 aaKnown RBP25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 ARID5AQ03989 594 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 PDCLQ13371 301 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 C10orf120Q5SQS8 335 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 CC2D1AQ6P1N0 951 aaPredicted RBP25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 SCUBE3Q8IX30 993 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 C1orf131Q8NDD1 294 aaKnown RBP25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 HEBP1Q9NRV9 189 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 GKN1Q9NS71 199 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 CLIC5Q9NZA1 410 aa25.03■■□□□ 1.6
UBE2E3-202ENST00000410062 KIF26AQ9ULI4 1882 aaPredicted RBP25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 SLC44A4Q53GD3 710 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 TRIM68Q6AZZ1 485 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 HFE2Q6ZVN8 426 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 SCML4Q8N228 414 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 SLC20A1Q8WUM9 679 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 DNASE1L2Q92874 299 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 ARHGEF3Q9NR81 526 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 CFAP97Q9P2B7 532 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 TJP2Q9UDY2 1190 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 COL4A3Q01955 1670 aa25.02■■□□□ 1.6
UBE2E3-202ENST00000410062 FAM170AA1A519 330 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 E5RJQ4 531 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 SCAMP3O14828 347 aaKnown RBP25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 GPR37L1O60883 481 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 MMEP08473 750 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 TCF3P15923 654 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 ACADSBP45954 432 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 TNK2Q07912 1038 aa25.01■■□□□ 1.59
UBE2E3-202ENST00000410062 TMEM31Q5JXX7 168 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms