RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SAC3D1A6NKF1 404 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 AGAP14A8MT82 685 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 J3KTA2 159 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 M0QYG6 137 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 KIAA0391O15091 583 aaKnown RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 PRICKLE3O43900 615 aaPredicted RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 CCNT2O60583 730 aaKnown RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 PGM3O95394 542 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 CHEK2O96017 543 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 RAP2AP10114 183 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 IL13P35225 146 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 NNMTP40261 264 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 BUD31P41223 144 aaPredicted RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 VIPR2P41587 438 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 ZNF135P52742 658 aaPredicted RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 SNX16P57768 344 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 DUSP2Q05923 314 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 EPS8Q12929 822 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 DCTN1Q14203 1278 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 KCNAB1Q14722 419 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 GRM4Q14833 912 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 PRICKLE4Q2TBC4 344 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 DUSP28Q4G0W2 176 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 CRB2Q5IJ48 1285 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 FAM69AQ5T7M9 428 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 SZRD1Q7Z422 152 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 GAS2L3Q86XJ1 694 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 ZDHHC14Q8IZN3 488 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 SRBD1Q8N5C6 995 aaKnown RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 STPG3Q8N7X2 389 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 DNERQ8NFT8 737 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 NFKBIDQ8NI38 313 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 MDM1Q8TC05 714 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 TBC1D5Q92609 795 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 GRAMD1AQ96CP6 724 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 SIK2Q9H0K1 926 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 SIL1Q9H173 461 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 DBNDD1Q9H9R9 158 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 BRF2Q9HAW0 419 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 ERVK-5Q9HDB9 667 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 ABCF3Q9NUQ8 709 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 ING3Q9NXR8 418 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 TAS2R10Q9NYW0 307 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 ZNF215Q9UL58 517 aaPredicted RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 CNTN6Q9UQ52 1028 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 CAMK2AQ9UQM7 478 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 NAALADL1Q9UQQ1 740 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 HPSEQ9Y251 543 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 ATP11BQ9Y2G3 1177 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 VWA7Q9Y334 891 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 USP15Q9Y4E8 981 aaPredicted RBP5.4□□□□□ -1.54
LSM5-205ENST00000409952 DUSP10Q9Y6W6 482 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 GTPBP10A4D1E9 387 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 B8ZZF3 427 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 VILLO15195 856 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 RRP9O43818 475 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 FOXD2O60548 495 aaPredicted RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 ERAL1O75616 437 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 GJB3O75712 270 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 BEST1O76090 585 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 KNG1P01042 644 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 CPA1P15085 419 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 SLC6A4P31645 630 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 ACSL1P33121 698 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 MMP14P50281 582 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 STAT5BP51692 787 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 RARSP54136 660 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 WASHC5Q12768 1159 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 GPS1Q13098 491 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 GALNTL6Q49A17 601 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 PLA1AQ53H76 456 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 FAM47AQ5JRC9 791 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 PHF19Q5T6S3 580 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 FAM160B1Q5W0V3 765 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 MCTP2Q6DN12 878 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 INO80CQ6PI98 192 aaPredicted RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 SLC22A25Q6T423 547 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 IQCA1Q86XH1 822 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 TTC39CQ8N584 583 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 ARL10Q8N8L6 244 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 MSANTD4Q8NCY6 345 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 TOR1AIP2Q8NFQ8 470 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 STAMQ92783 540 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 SCAMP4Q969E2 229 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 FAM227BQ96M60 508 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 MOGAT1Q96PD6 335 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 MYOCQ99972 504 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 NDC1Q9BTX1 674 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 TTPALQ9BTX7 342 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 USP44Q9H0E7 712 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 OR10A4Q9H209 315 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 SLC25A32Q9H2D1 315 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 MUC13Q9H3R2 512 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 UNKLQ9H9P5 680 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 SPON1Q9HCB6 807 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms