RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 DDX21Q9NR30 783 aaKnown RBP eCLIP5.28□□□□□ -1.56
CLK1-203ENST00000409769 KLC4Q9NSK0 619 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.28□□□□□ -1.56
CLK1-203ENST00000409769 STAP2Q9UGK3 403 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 OVOS2A0A0J9YW53 1432 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 OVOS2Q6IE36 1432 aa5.28□□□□□ -1.56
CLK1-203ENST00000409769 CGNL1Q0VF96 1302 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 FRMPD2Q68DX3 1309 aaPredicted RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 TTC21BQ7Z4L5 1316 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 PXDNQ92626 1479 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 A0A0B4J269 797 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 WDR27A2RRH5 827 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 ADM5C9JUS6 153 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 GOLIM4O00461 696 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 URI1O94763 535 aaPredicted RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 GRPP07492 148 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 MYBP10242 640 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 XRCC6P12956 609 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLK1-203ENST00000409769 RHCEP18577 417 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 GCLCP48506 637 aaPredicted RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 RHDQ02161 417 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 MAPK7Q13164 816 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 TUBB3Q13509 450 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 BOP1Q14137 746 aaKnown RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 POLD3Q15054 466 aaPredicted RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 LLGL1Q15334 1064 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 SRSF7Q16629 238 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLK1-203ENST00000409769 LONRF3Q496Y0 759 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 CC2D1BQ5T0F9 858 aaKnown RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 SUMO4Q6EEV6 95 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 SFRP4Q6FHJ7 346 aaPredicted RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 DARS2Q6PI48 645 aaKnown RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 ZNF783Q6ZMS7 281 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 BHLHA9Q7RTU4 235 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 WDR75Q8IWA0 830 aaKnown RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 OR6B3Q8NGW1 331 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 TTC17Q96AE7 1141 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 PBKQ96KB5 322 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 ZNF778Q96MU6 729 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 HAPLN3Q96S86 360 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 P2RX7Q99572 595 aaKnown RBP5.27□□□□□ -1.57
CLK1-203ENST00000409769 SEMA4CQ9C0C4 833 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 SMOC2Q9H3U7 446 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 SMURF2Q9HAU4 748 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLK1-203ENST00000409769 ROBO1Q9Y6N7 1651 aa5.27□□□□□ -1.57
CLK1-203ENST00000409769 AHDC1Q5TGY3 1603 aaPredicted RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 ZNF804BA4D1E1 1349 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 TTC21AQ8NDW8 1320 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 SMG6Q86US8 1419 aaKnown RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 MANSC4A6NHS7 340 aaPredicted RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 LINC01548A6NM66 108 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 LINC00473A8K010 186 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 DCLK1O15075 740 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 TTLL1O95922 423 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 CHRM2P08172 466 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 PPP3CBP16298 524 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 ITGALP20701 1170 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 ITPKBP27987 946 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 PPIFP30405 207 aaKnown RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 SLC11A2P49281 568 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 LOXL3P58215 753 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 IQCB1Q15051 598 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 RNF220Q5VTB9 566 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 SLC30A10Q6XR72 485 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 BRINP3Q76B58 766 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 GAS2L3Q86XJ1 694 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 FAM156AQ8NDB6 213 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 SEMA6DQ8NFY4 1073 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 LRTOMTQ8WZ04 291 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 DPF1Q92782 380 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 NMD3Q96D46 503 aaKnown RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 APIPQ96GX9 242 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 MESP1Q9BRJ9 268 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 AMBRA1Q9C0C7 1298 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 XPR1Q9UBH6 696 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 TPCN1Q9ULQ1 816 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 TMX2Q9Y320 296 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 SHPRHQ149N8 1683 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 SBNO1A3KN83 1393 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 PHRF1Q9P1Y6 1649 aaKnown RBP5.26□□□□□ -1.57
CLK1-203ENST00000409769 ABCA3Q99758 1704 aa5.26□□□□□ -1.57
CLK1-203ENST00000409769 AOX1Q06278 1338 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 MED1Q15648 1581 aaPredicted RBP5.25□□□□□ -1.57
CLK1-203ENST00000409769 LTN1O94822 1766 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 SLIT3O75094 1523 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 F5H697 171 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 BTN3A1O00481 513 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 TBX3O15119 743 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 KITP10721 976 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 MYF5P13349 255 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 PPP2R1AP30153 589 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 SEMA5AQ13591 1074 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 CCDC184Q52MB2 194 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 PLAC9Q5JTB6 97 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 LMBRD2Q68DH5 695 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms