RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KLC1Q07866 573 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 DGKZQ13574 1117 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PTK6Q13882 451 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 DEFB115Q30KQ5 88 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ARMCX6Q7L4S7 300 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 TLK2Q86UE8 772 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 FAM151AQ8WW52 585 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 RAD21L1Q9H4I0 556 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PXMP2Q9NR77 195 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 NR5A2O00482 541 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 USP17L7P0C7H9 530 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CYP24A1Q07973 514 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 AP5B1Q2VPB7 878 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 MOB2Q70IA6 237 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ANO5Q75V66 913 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CHP1Q99653 195 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 ADIGQ0VDE8 80 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SLFN11Q7Z7L1 901 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 ERO1BQ86YB8 467 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TTC39CQ8N584 583 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 ADGRE3Q9BY15 652 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SYBUQ9NX95 663 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 DIS3Q9Y2L1 958 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CCL16O15467 120 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 GRIK4Q16099 956 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 OLFML2BQ68BL8 750 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 C11orf88Q6PI97 169 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SLC30A10Q6XR72 485 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 EFL1Q7Z2Z2 1120 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 P3H2Q8IVL5 708 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 LGI2Q8N0V4 545 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CHST13Q8NET6 341 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 OR2W6PQ8NHA6 318 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 GFM2Q969S9 779 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SSH2Q76I76 1423 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 DAB1O75553 588 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CXCL8P10145 99 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CDC25BP30305 580 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 NUDT2P50583 147 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MAPRE2Q15555 327 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TTC39BQ5VTQ0 682 aaPredicted RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 DPP10Q8N608 796 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 RNF31Q96EP0 1072 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 UBXN6Q9BZV1 441 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MRPL39Q9NYK5 338 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SNCAIPQ9Y6H5 919 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 KDM6AO15550 1401 aaPredicted RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TAF5Q15542 800 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TRIM71Q2Q1W2 868 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 FRMD6Q96NE9 622 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MROH8Q9H579 483 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CLTCQ00610 1675 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SEPT4O43236 478 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 APOA1P02647 267 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CES3Q6UWW8 571 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 ARNTL2Q8WYA1 636 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MRPL17Q9NRX2 175 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MRPS23Q9Y3D9 190 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 XYLBO75191 536 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SOAT2O75908 522 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 BYSLQ13895 437 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MFSD10Q14728 455 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 FSCN1Q16658 493 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 DGKKQ5KSL6 1271 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 ALLCQ8N6M5 410 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 CRAMP1Q96RY5 1269 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 EIF3LQ9Y262 564 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MIF4GDA9UHW6 222 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 OR10H2O60403 315 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SCNN1AP37088 669 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TKTL1P51854 596 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 UAP1L1Q3KQV9 507 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TRAF7Q6Q0C0 670 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 DEFB119Q8N690 84 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 TSC22D3Q99576 134 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 MTFR1LQ9H019 292 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 AGPAT5Q9NUQ2 364 aa8.67□□□□□ -1.02
SCN9A-203ENST00000409672 RBM7Q9Y580 266 aaKnown RBP8.67□□□□□ -1.02
SCN9A-203ENST00000409672 SMIM22K7EJ46 135 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RRM2P31350 389 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CAV1Q03135 178 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 TEDDM1Q5T9Z0 273 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 ZNF280DQ6N043 979 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RBM15Q96T37 977 aaKnown RBP eCLIP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 ADAM2Q99965 735 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 TBX20Q9UMR3 447 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CRYL1Q9Y2S2 319 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 O00370 1275 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RFC5P40937 340 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 PPP2R2AP63151 447 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 TKFCQ3LXA3 575 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 OVOS1Q6IE37 1185 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 GLT6D1Q7Z4J2 308 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms