RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 ANKS3Q6ZW76 656 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 DEFB128Q7Z7B8 93 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 SPATA2LQ8IUW3 424 aaPredicted RBP10.25□□□□□ -0.77
POLR1A-202ENST00000409024 CMTR2Q8IYT2 770 aaKnown RBP10.25□□□□□ -0.77
POLR1A-202ENST00000409024 TSC1Q92574 1164 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 NT5C3BQ969T7 300 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 MYLPFQ96A32 169 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF689Q96CS4 500 aaPredicted RBP10.25□□□□□ -0.77
POLR1A-202ENST00000409024 SLITRK1Q96PX8 696 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 SLC2A13Q96QE2 648 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 SLC9A7Q96T83 725 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 KRT12Q99456 494 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 OSBPL8Q9BZF1 889 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 PRDM12Q9H4Q4 367 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 POPDC2Q9HBU9 364 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 GDF3Q9NR23 364 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 EHD2Q9NZN4 543 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 CACNG4Q9UBN1 327 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 DNAJB4Q9UDY4 337 aa10.25□□□□□ -0.77
POLR1A-202ENST00000409024 TIMM13Q9Y5L4 95 aaPredicted RBP10.25□□□□□ -0.77
POLR1A-202ENST00000409024 TSC2P49815 1807 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 HHLA1C9JL84 531 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 CLDN5O00501 218 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 NDC80O14777 642 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 TRIM66O15016 1216 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 TBC1D4O60343 1298 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 GJB6O95452 261 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 EFEMP2O95967 443 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ZBED1O96006 694 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 F9P00740 461 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 KRT1P04264 644 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ITGB1P05556 798 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 LCP1P13796 627 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 IBSPP21815 317 aaPredicted RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 IGFBP4P22692 258 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 MIPP30301 263 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 FLT3P36888 993 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 TKTL1P51854 596 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF135P52742 658 aaPredicted RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 EPHB4P54760 987 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 BCAR1P56945 870 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 MAP3K7CLP57077 242 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 DAOAP59103 153 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 RNASE9P60153 205 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ADCY1Q08828 1119 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ADIGQ0VDE8 80 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 TCTN1Q2MV58 587 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 PAN2Q504Q3 1202 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 FUT10Q6P4F1 479 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 FBXO38Q6PIJ6 1188 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 SPOCD1Q6ZMY3 1216 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 BNIPLQ7Z465 357 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 CCDC50Q8IVM0 306 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ARFGAP1Q8N6T3 406 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 EMC1Q8N766 993 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 PRELID2Q8N945 189 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 ZMIZ2Q8NF64 920 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 OR10T2Q8NGX3 314 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 FAM71BQ8TC56 605 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 MAGOHBQ96A72 148 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 VWCEQ96DN2 955 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 PGAP3Q96FM1 320 aaPredicted RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 PKNOX2Q96KN3 472 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 LPIN3Q9BQK8 851 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 AP1M1Q9BXS5 423 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 IL23AQ9NPF7 189 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 FAM114A2Q9NRY5 505 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 MARCH5Q9NX47 278 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 SMARCAL1Q9NZC9 954 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 HSFX1Q9UBD0 423 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 MAFFQ9ULX9 164 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 DRG1Q9Y295 367 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 PRG3Q9Y2Y8 225 aaPredicted RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 UTP11Q9Y3A2 253 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 PCDHB5Q9Y5E4 795 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 BACE2Q9Y5Z0 518 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 USP3Q9Y6I4 520 aa10.24□□□□□ -0.77
POLR1A-202ENST00000409024 TCF20Q9UGU0 1960 aaKnown RBP10.24□□□□□ -0.77
POLR1A-202ENST00000409024 FAM170AA1A519 330 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 I3L4J1 428 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 RAD51CO43502 376 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 B4GALT3O60512 393 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 GPR37L1O60883 481 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF189O75820 626 aaPredicted RBP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 BEST1O76090 585 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 HEXIM1O94992 359 aaKnown RBP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 RARAP10276 462 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 RALAP11233 206 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 LAG3P18627 525 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 KDELR1P24390 212 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 COILP38432 576 aaPredicted RBP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 CDKN2BP42772 138 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 CLCN6P51797 869 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 VSNL1P62760 191 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 DR1Q01658 176 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 FPGSQ05932 587 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 GPR17Q13304 367 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms