RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RETP07949 1114 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ADH5P11766 374 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ACO1P21399 889 aaKnown RBP9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 FNTBP49356 437 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 MRPS21P82921 87 aaKnown RBP9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ORC1Q13415 861 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 E2F5Q15329 346 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 DHCR24Q15392 516 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ANKRD40Q6AI12 368 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 CCDC186Q7Z3E2 898 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 TRMT11Q7Z4G4 463 aaKnown RBP9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 KIAA2013Q8IYS2 634 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ZNF276Q8N554 614 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 C12orf29Q8N999 325 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ZMIZ2Q8NF64 920 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 RPLP0P6Q8NHW5 317 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 SCAMP5Q8TAC9 235 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 RIN3Q8TB24 985 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 GAB3Q8WWW8 586 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 TMEM176AQ96HP8 235 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 LOXL4Q96JB6 756 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 PNKPQ96T60 521 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 UBXN6Q9BZV1 441 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 RNF38Q9H0F5 515 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 APOBEC3GQ9HC16 384 aaKnown RBP9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 CISHQ9NSE2 258 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 CLIC5Q9NZA1 410 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 CHORDC1Q9UHD1 332 aaPredicted RBP9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 KIAA1257Q9ULG3 409 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 USP18Q9UMW8 372 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ZNF510Q9Y2H8 683 aa9.58□□□□□ -0.88
SNORD88A-201ENST00000408314 ZBTB24O43167 697 aaPredicted RBP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 HOXC11O43248 304 aaPredicted RBP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 RPP40O75818 363 aaKnown RBP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 CCDC192P0DO97 292 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 GRIA2P42262 883 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 KIF11P52732 1056 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 BCAT1P54687 386 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 CUL2Q13617 745 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 DMC1Q14565 340 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 PUM1Q14671 1186 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 STILQ15468 1287 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 ELF2Q15723 593 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 ZNF394Q53GI3 561 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 SGO2Q562F6 1265 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 ARHGAP17Q68EM7 881 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 HEATR6Q6AI08 1181 aaKnown RBP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 CACNA2D4Q7Z3S7 1137 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 ADGRG2Q8IZP9 1017 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 TSTD1Q8NFU3 115 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 SLC35C1Q96A29 364 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 JAKMIP2Q96AA8 810 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 CHFRQ96EP1 664 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 NT5C1BQ96P26 610 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 XPO6Q96QU8 1125 aaKnown RBP9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 TWNKQ96RR1 684 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 DCLK3Q9C098 648 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 LINC00597Q9H2U6 94 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 ARHGEF4Q9NR80 690 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 DEC1Q9P2X7 70 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 EBF1Q9UH73 591 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 DNMT3LQ9UJW3 386 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 NAGPAQ9UK23 515 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 MAN1B1Q9UKM7 699 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 STRIP2Q9ULQ0 834 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 MYO16Q9Y6X6 1858 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 CFAP54Q96N23 3096 aa9.57□□□□□ -0.88
SNORD88A-201ENST00000408314 SPTBN4Q9H254 2564 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 AXIN1O15169 862 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 CYP26A1O43174 497 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 PAEPP09466 180 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 SETSIPP0DME0 302 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 VDRP11473 427 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 RARGP13631 454 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 OPRD1P41143 372 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 TNFRSF4P43489 277 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 PLA2G4AP47712 749 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 FMO5P49326 533 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 DGKEP52429 567 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 UBE2HP62256 183 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 COG7P83436 770 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 BST2Q10589 180 aaKnown RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 PAK1Q13153 545 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 BYSLQ13895 437 aaKnown RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 CBWD6Q4V339 395 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 CBWD3Q5JTY5 395 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 EOGTQ5NDL2 527 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 CBWD5Q5RIA9 395 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 C10orf120Q5SQS8 335 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 SMYD5Q6GMV2 418 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 HTR3DQ70Z44 454 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 RSRC2Q7L4I2 434 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms