RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 GPR20Q99678 358 aa16.9■□□□□ 0.3
LSP1-204ENST00000406638 TBX20Q9UMR3 447 aa16.9■□□□□ 0.3
LSP1-204ENST00000406638 PLA2G4CQ9UP65 541 aa16.9■□□□□ 0.3
LSP1-204ENST00000406638 IGKV6D-21A0A0A0MT36 114 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 A0A0J9YVX5 310 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 TTLL13PA6NNM8 815 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 IFNB1P01574 187 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 HPCAP84074 193 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 GRM1Q13255 1194 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 MSLNQ13421 630 aaPredicted RBP16.89■□□□□ 0.29
LSP1-204ENST00000406638 EFHC2Q5JST6 749 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 RBM44Q6ZP01 1051 aaKnown RBP16.89■□□□□ 0.29
LSP1-204ENST00000406638 LRRC71Q8N4P6 559 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 ACCSQ96QU6 501 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 FOXP3Q9BZS1 431 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 GMEB1Q9Y692 573 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 LRRC37A2A6NM11 1700 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 MEI4A8MW99 385 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 LPXNO60711 386 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 KITP10721 976 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 UQCRBP14927 111 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 ASPHQ12797 758 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 TMED1Q13445 227 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 HNRNPDQ14103 355 aaKnown RBP16.89■□□□□ 0.29
LSP1-204ENST00000406638 MMEL1Q495T6 779 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 CELF3Q5SZQ8 465 aaKnown RBP16.89■□□□□ 0.29
LSP1-204ENST00000406638 C3orf62Q6ZUJ4 267 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 DGCR14Q96DF8 476 aaKnown RBP16.89■□□□□ 0.29
LSP1-204ENST00000406638 HSPBP1Q9NZL4 362 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 CLUHO75153 1309 aa16.89■□□□□ 0.29
LSP1-204ENST00000406638 MYH9P35579 1960 aaKnown RBP16.89■□□□□ 0.29
LSP1-204ENST00000406638 CAPN14A8MX76 684 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 TM9SF1O15321 606 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 DGAT1O75907 488 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 ADCYAP1R1P41586 468 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 MXI1P50539 228 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 NCOA4Q13772 614 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 ZNF792Q3KQV3 632 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 CENPUQ71F23 418 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 TRIM42Q8IWZ5 723 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 HIPK4Q8NE63 616 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 SEPT1Q8WYJ6 367 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 ZNF395Q9H8N7 513 aaPredicted RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 TOPORSQ9NS56 1045 aaPredicted RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 ZNF232Q9UNY5 417 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 ARHGAP42A6NI28 874 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 VILLO15195 856 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 MAGEB3O15480 346 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 HNRNPCP07910 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
LSP1-204ENST00000406638 KRT5P13647 590 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 GLRA2P23416 452 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 MFAP3P55082 362 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 SH3BGRP55822 239 aaPredicted RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 PDK3Q15120 406 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 PRAMEF19Q5SWL8 479 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 STXBP4Q6ZWJ1 553 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 DHDDSQ86SQ9 333 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 PRPF39Q86UA1 669 aaKnown RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 FAM172AQ8WUF8 416 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 SHC3Q92529 594 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 SSU72Q9NP77 194 aaKnown RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 MARCOQ9UEW3 520 aaPredicted RBP16.88■□□□□ 0.29
LSP1-204ENST00000406638 ADAMTS6Q9UKP5 1117 aa16.88■□□□□ 0.29
LSP1-204ENST00000406638 SMIM31A0A1B0GVY4 71 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 SPECC1L-ADORA2AF8WAN1 911 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 NOP56O00567 594 aaKnown RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 ADCY6O43306 1168 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 TGDSO95455 350 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 CCDC166P0CW27 439 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 MAPTP10636 758 aaKnown RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 ATF7P17544 494 aaPredicted RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 PEX2P28328 305 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 ALDH18A1P54886 795 aaKnown RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 TMCO4Q5TGY1 634 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 DUS1LQ6P1R4 473 aaKnown RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 SLC26A7Q8TE54 656 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 DDX1Q92499 740 aaKnown RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 USP6NLQ92738 828 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 ZBTB45Q96K62 511 aaPredicted RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 PPP1R16BQ96T49 567 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 LIASO43766 372 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 SORBS2O94875 1100 aaKnown RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 SNAI1O95863 264 aaPredicted RBP16.87■□□□□ 0.29
LSP1-204ENST00000406638 GALK1P51570 392 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 PDE1BQ01064 536 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 GRM2Q14416 872 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 MSS51Q4VC12 460 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 SEZ6Q53EL9 994 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 ADGRD1Q6QNK2 874 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
LSP1-204ENST00000406638 PYROXD1Q8WU10 500 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms