RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 KCNMB3Q9NPA1 279 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 PIK3CDO00329 1044 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 H2AFYO75367 372 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SUPT7LO94864 414 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 JCHAINP01591 159 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 BFSP2Q13515 415 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 FLOT2Q14254 428 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 FICDQ9BVA6 458 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 STRNO43815 780 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 CNTFP26441 200 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 EFEMP1Q12805 493 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 TTLL9Q3SXZ7 439 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 AARS2Q5JTZ9 985 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 HASPINQ8TF76 798 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SHOC2Q9UQ13 582 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 MBL2P11226 248 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 TARSP26639 723 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SGO1Q5FBB7 561 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 HS6ST3Q8IZP7 471 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 CLEC4FQ8N1N0 589 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 TRAPPC12Q8WVT3 735 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 ELMO3Q96BJ8 720 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SHCBP1LQ9BZQ2 653 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 AVENQ9NQS1 362 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 GRIK5Q16478 980 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 ZNF280DQ6N043 979 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 PCDHA3Q9Y5H8 950 aa13.74□□□□□ -0.21
CACNA1C-222ENST00000406454 SLC12A8A0AV02 714 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 DAB2IPQ5VWQ8 1189 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 APOL2Q9BQE5 337 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 WWOXQ9NZC7 414 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 DRG1Q9Y295 367 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 ASS1P00966 412 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 ZC3H12BQ5HYM0 836 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 BHMTQ93088 406 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 FAM162AQ96A26 154 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 MRIQ9BWK5 157 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 IL1RL2Q9HB29 575 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 USP20Q9Y2K6 914 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 FAM32AQ9Y421 112 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 FKBP9O95302 570 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SOX11P35716 441 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 STX5Q13190 355 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SLC9A5Q14940 896 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 CBWD3Q5JTY5 395 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 CBWD5Q5RIA9 395 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 FKBP9P1Q75LS8 142 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 COLGALT1Q8NBJ5 622 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 CCDC126Q96EE4 140 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 FAR2Q96K12 515 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 TRPM5Q9NZQ8 1165 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 PPLO60437 1756 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 CASTOR2A6NHX0 329 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 VPS26AO75436 327 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SKAP2O75563 359 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 KCNMA1Q12791 1236 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 NFIL3Q16649 462 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 NT5DC3Q86UY8 548 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 DNAJB3Q8WWF6 145 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 PSMD10O75832 226 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 PAEPP09466 180 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 KLC1Q07866 573 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 C17orf80Q9BSJ5 609 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 RAB21Q9UL25 225 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 KIF20BQ96Q89 1820 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 DNALI1O14645 258 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 NFE2Q16621 373 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 ZDHHC17Q8IUH5 632 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 RBBP8Q99708 897 aa13.73□□□□□ -0.21
CACNA1C-222ENST00000406454 C16orf96A6NNT2 1141 aa13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 RIPK2O43353 540 aa13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 PYGMP11217 842 aa13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 POLD3Q15054 466 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 MRPS31Q92665 395 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 CHST12Q9NRB3 414 aa13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 MYO1GB0I1T2 1018 aa13.72□□□□□ -0.21
CACNA1C-222ENST00000406454 O00370 1275 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms